Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02970 ATGGTTACAACCACTATTAACTCGTACATTGAGAACCATCAAGGAAGATATGTTATATATGTTAAAATGGGTGTCTACCATGAGTACATTACTATCGTGCTTGCAGCCACCTTTGGTAAAGACTTCATTGCCATGTCAATTGCATTTGAGAATAAAGCTGGTCCAAAAGCTCAACAAGTAGTAGTACTTCTTGTTGAAGACATTGAGCTATATCCCTATCGGTTTACAGTGAAGATTTACTTGGCAAGGCCATGGAAGGCTTTTCAAGGGCGTGCCAATGCTACAACAAAAGTTAAATGGGCAAAAGGTGTCATTAATAGAAATGAAGCTATTAGGTTCACTATTGGACCATGGTTTAATGCTAACACTTGGTTGCCTTTCACTGGCGTGCCATACAATGTAGGATTATAG 411 0.3893 MVTTTINSYIENHQGRYVIYVKMGVYHEYITIVLAATFGKDFIAMSIAFENKAGPKAQQVVVLLVEDIELYPYRFTVKIYLARPWKAFQGRANATTKVKWAKGVINRNEAIRFTIGPWFNANTWLPFTGVPYNVGL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02970 136 PANTHER PECTINESTERASE 92 135 - -
Car06g02970 136 PANTHER PECTINESTERASE 36 66 - -
Car06g02970 136 PANTHER PECTINESTERASE 2 32 - -
Car06g02970 136 PANTHER PECTINESTERASE 2 32 - -
Car06g02970 136 SUPERFAMILY Pectin lyase-like 6 134 IPR011050 -
Car06g02970 136 PANTHER PECTINESTERASE 92 135 - -
Car06g02970 136 PANTHER PECTINESTERASE 36 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02970 Car-Chr6 50225655 50226451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02970 4 66 Carbohydrate Esterase AT2G26450 32.673 3.35e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02970 K01051 - mtr:MTR_5g083590 80.4925