Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02965 ATGAGAGCTATATTAAGATCTATTTTTTCCATGTCATCCTCTGCTTTTAACACCCCCAGGTTGGTTTTCAAGAAGGTTTTGGCCAAATCTCAACGTGAAGGAGATGGAGCTGTTGTTAGAAGAGGCATTGGAAGAAGCGAGCTCAAGAACTTGGATCCTTTTCTAATTTTGGATCACTTCTCAGTGTCTCCTCCTGGAGGATTTCCTGATCATCCCCACAGAGGTTTTGAGACCGTTACCTACATGCTAGAGGGTAGTATAACTCACCAAGATTTTGCTGGCCACAAGGGTACAATAAGAACTGGTGATGTTCAGTGGATGACTGCAGGCAGGGGAATTATCCACTCTGAAATGCCTGCAGAAGCAAACAACAATGGATTGCAACTCTGGATCAATTTATCAGCCAATAACAAAATGATTGAGCCAAACTATCAAGAACTTCCAAGTGAGGAAATAGCATCAGCAGAAAAGGAGGGTGTTGAAGTGAGAGTGATAGCAGGAGGAGCAATGGGAGTGAATTCTCCAGTCTACACAAGAACTCCAACAATGTTCCTAGATTTCTCCATGATGCCAGGAACTCAACTGGATCAAAGTATTCCTGAGTCATGGAATTCATTTGCATATATAATTGAAGGGGAAGGTGTTTTTGGTTCACCAAATTCATCACCAATTGTGGCTCATCATGTTATTGTTTTCACTCAAGGTGGTGATGGACTTAGTGTTTGGAATAAATCTTCAAAGCCTTTGAGGTTTGTGTTGATTGGAGGACAACCATTGAATGAGCCAATTGCTCAATATGGACCTTTTGTCATGAATACACAATCTGAGATTGAGAAAACTATTCAAGACTATCACAATTGCAGCAATGGATTTGAGATGAGGCTAAATTGGAGATCTCAATAG 903 0.4097 MRAILRSIFSMSSSAFNTPRLVFKKVLAKSQREGDGAVVRRGIGRSELKNLDPFLILDHFSVSPPGGFPDHPHRGFETVTYMLEGSITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAEANNNGLQLWINLSANNKMIEPNYQELPSEEIASAEKEGVEVRVIAGGAMGVNSPVYTRTPTMFLDFSMMPGTQLDQSIPESWNSFAYIIEGEGVFGSPNSSPIVAHHVIVFTQGGDGLSVWNKSSKPLRFVLIGGQPLNEPIAQYGPFVMNTQSEIEKTIQDYHNCSNGFEMRLNWRSQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02965 300 CDD cupin_pirin_C 181 258 - -
Car06g02965 300 Pfam Pirin 40 131 IPR003829 -
Car06g02965 300 Gene3D Jelly Rolls 33 286 IPR014710 -
Car06g02965 300 CDD cupin_pirin_N 37 133 - -
Car06g02965 300 PANTHER PIRIN-LIKE PROTEIN 13 300 - -
Car06g02965 300 Pfam Pirin C-terminal cupin domain 184 289 IPR008778 -
Car06g02965 300 Gene3D Jelly Rolls 153 259 IPR014710 -
Car06g02965 300 PANTHER PIRIN-RELATED 13 300 IPR012093 -
Car06g02965 300 SUPERFAMILY RmlC-like cupins 20 298 IPR011051 -
Car06g02965 300 PIRSF Pirin 18 298 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02965 Car-Chr6 49988950 49990914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02965 17 293 Calmodulin-binding Proteins AT3G59220 65.591 6.14e-133 377