Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02963 ATGTATCGAATCCTGAGCTTTCCCAAAATCCAACCATTATTTTCTTTCTCCCCTCTCATGGCTTCCACAGCAACACCTTCTCCACAAATTCTATTATTCAATCCCATCTTAGGAAACACAAAAACAATTAGAGCAGTAAGGTTTTATAGAACAACCACTCACAACAGATACACCACTCTGAATGTTTACGGTTCTAAAGACTCTCAGAGTCCTCAGAGAGCACCACCTGGAGTTGACACAAGAATCCACTGGGAGAATGAAGATGAAGGTTGGGTTGGAGGTAGCACTAAAAGTAGTGAAAAAAAGAAACAAACCAATTCAGAGGAAAAACCTAATAAGCTGTTGGGTGAAGACTTTGGTGATTTACTCAGTTTTGAAGGTTCTCATTATGAATTCTTGGGAGTATCCCCGGAGGCTGATTTAGAAGAAATTAAAGTAACTTTCAGGAAATTATCAAAGGAGTATCATCCAGACACAACTTCTCTCCCATTAAAAACCGCCTCAGAAAAATTCATGAAACTAAGAGAGGTTTACAATGTTCTTAGCAATGAAGAAAGTAGGAGATTTTATGATTGGACCCTTGCTCAAGAGGTTGCAAGTCGCCAACAAGAGAAATTGAAAATTAAATTAGAAGATCCTTATGAGATAGAATTGAAGAATTATGAACCTGTTCCAGACATGGTTGATAGACTTGGTGGAAAGAATATGAAGCTTAGTGATCAAGCTGTCTCTGCTCTCACTATTGATATTTTTATCATTATTTTTGCCATATGTTGTGTCACTTATGTAGTTTTCTTTAAAGAACCATATTACTGA 816 0.3701 MYRILSFPKIQPLFSFSPLMASTATPSPQILLFNPILGNTKTIRAVRFYRTTTHNRYTTLNVYGSKDSQSPQRAPPGVDTRIHWENEDEGWVGGSTKSSEKKKQTNSEEKPNKLLGEDFGDLLSFEGSHYEFLGVSPEADLEEIKVTFRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSNEESRRFYDWTLAQEVASRQQEKLKIKLEDPYEIELKNYEPVPDMVDRLGGKNMKLSDQAVSALTIDIFIIIFAICCVTYVVFFKEPYY 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02963 271 Gene3D DnaJ domain 123 214 IPR036869 -
Car06g02963 271 MobiDBLite consensus disorder prediction 89 114 - -
Car06g02963 271 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 49 270 IPR044618 -
Car06g02963 271 ProSiteProfiles dnaJ domain profile. 128 194 IPR001623 -
Car06g02963 271 SMART dnaj_3 127 186 IPR001623 -
Car06g02963 271 SUPERFAMILY Chaperone J-domain 83 190 IPR036869 -
Car06g02963 271 ProSitePatterns Nt-dnaJ domain signature. 171 190 IPR018253 -
Car06g02963 271 CDD DnaJ 129 183 IPR001623 -
Car06g02963 271 Pfam DnaJ domain 129 191 IPR001623 -
Car06g02963 271 PRINTS DnaJ domain signature 130 148 IPR001623 -
Car06g02963 271 PRINTS DnaJ domain signature 148 163 IPR001623 -
Car06g02963 271 PRINTS DnaJ domain signature 166 186 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02963 Car-Chr6 49962191 49963620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02963 129 196 C2H2 Transcription Factor Family AT1G74250 36.111 1.80e-07 50.1