Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02950 ATGATGCCTGGCACAAGTATGGGTGCACCACATATTGCAGGTCTTGCTGCACTTATTAAGCAGAAGTTCCCAAATTTCAGTCCTCCAGCCATTGGTTCTGCACTTTCTACTACTGCGTCTCAGAATGATAAGAGTGGTGGACCGATAATGGCTCAGCGATCGTGTGCTTTTCCAGATCTAAGCCAAACCCCGACTACTCCTTTTGACATGGTGTTTCATGCTAATGTCATTGGAAATATTCAAGGAAGAAATCCAGAGATTTGCTTGAGAAGGTTGTTGGGCAAGGTGATCTTACTAGTTATAGAGTTCCTTGCTGCTAAGGATGATCTAACTCCATATTCAAGGGCAATCCAAGATTCAGTCAAGGTTACTCGGGACTTGGGAATAGAGGCACCTATTCACGTAATTGTGACCACAACGACATTTGTTGGTTTGGTAGCATGTCGTGCATATGCAGTGAAGAAGAACTCTTCTGCCTAG 480 0.4417 MMPGTSMGAPHIAGLAALIKQKFPNFSPPAIGSALSTTASQNDKSGGPIMAQRSCAFPDLSQTPTTPFDMVFHANVIGNIQGRNPEICLRRLLGKVILLVIEFLAAKDDLTPYSRAIQDSVKVTRDLGIEAPIHVIVTTTTFVGLVACRAYAVKKNSSA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02950 159 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.2 1 70 - -
Car06g02950 159 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 70 IPR045051 -
Car06g02950 159 Gene3D Peptidase S8/S53 domain 1 48 IPR036852 GO:0004252|GO:0006508
Car06g02950 159 Pfam Subtilase family 1 44 IPR000209 GO:0006508|GO:0008236
Car06g02950 159 ProSiteProfiles Serine proteases, subtilase domain profile. 1 56 - -
Car06g02950 159 SUPERFAMILY Subtilisin-like 2 50 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02950 Car-Chr6 48846580 48847580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02950 1 70 Subtilisin-like Serine Gene Family AT1G30600 67.143 2.31e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02950 - - lja:Lj6g3v1126260.1 122.479