Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02947 ATGGCTTTTTGGGGTGTTGAAATCAAACCTGGAAAGCCTTTTTCTCACCAATTCGATGCTTCCAAAGGCCGTCTCCACATTTCAATGGCCACTTTGGGACTTGGCAGTGCAATTACAAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTATTTATCTTTGCTCTCTTTATCCTGGAAAAACAGAGTCTTTGCAATTGAATTTGGAGCTTGAAGAAGATGGTAAAGTTGTTTTATCCGTCATTGGCCCTCGGAGTATTCATCTCTGTGGTTATTATCTGGCCCGTGGTCGCTATTCCAATACTATTGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAGACAGAGAGATCTGATCACAGTGATGAAGATGACTACGATGATAGTTTTATTGATGACGACGGTGATCCAGCAGTTTTCCCACCATCTCCTATTTCCAATGAAGAGGAAGCTTCTTATGATAGTGGACGAAAAAGTGTGAAAGGCAGCCGAAGACGGCTGAAGAAGAAGTACCAAATGGTAGAGTCGGATGATGATGACTGTCTTGAAGACAAGAAAATTGTCAATGACAGTATGCATGCCCAATCTCAGGAAATTGTTAACGAAGATAGTCTACCAATTTCATCTGTTTGCAAGAATAAAGCTTCTGGAAGGATCTTTGATCAGGAGATGGATGATAATGTTGACAGAGAAGCAATTGATGCTGGCAACAAAGATGGTGATGACCATGGGAATAGTGTTATTGAAACAAAATTGATTAATGACAATGTTGTTCTAGATAGTGAGACTCATAGGGAAGCTGAACCTTCAGATCACTTGGTAGATCCTTGCACTGTTCTGGATGTTGGGGAAATTAAAAAGTCAaaaaagaaaaagaagggaaaggaaaaagaaaCAAAGAGTTCTTGTAATGGCCATTCCACTGAACTAGGTAGTGCTGCGCAAGATGAGCAAAACATGAACATGACCCAGGGGGATCTTCTGGTTGGAAATGAAGAGCATCAGAAGCAATCTGATGACAAGAAAACTGAAACCACAGATAAAATACTACCTTCCTCACAGGTTGGTCAAGGACAGGATGAAAAACCCAAGAGAAAAAGGAAGGAACGGCCAAAGGAGGAGACATTTGTTACTGCTGATGGTGCTTCTATTAGCAATCTTGTTAACCCGTCTCAGGGAACTGAACACGCAATTAATGAGGATGTTAAGATTTCAGACATTGTTGCATTGCCTTCCACTGAAACGGATTCTCAAAAGAGAACAAAGAGGAAAAAGAAAGAACATATAAACAAAGCTTCACATCCTGAAAGTGACAATGGAAACGATGAAGGTACCATTCAAGATAACAAAGCAAACAAAGAGACAGCAGATTCCGATAGTAAAGTTTCTGAAAAGAAAGAGCAAGATCAAAAGCTAACAATTGAAAACAGTGTGGACAATGGTGTTCATGACAATCCTGATGGAAATCAATCTGAAGTTAAGAAAGTTAAGAAAAAGAGGAAGAAGAGTAAAAGTCAGGGCAATGAAGATGTAAATTCTCATGTGCCTGTATCTATTGAGGAAACTACTGAGATGATGATAGTGGATGGAAATAACATTAATATGGAGGATTCAGAGCCTTCCCAAGTTAGAACATTGGAAAATGGGCTAGTTGTTCAAGAGCTAGAGATAGGGACAGAAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAGTGGTAGTTGATTCAAATGCTGGCAAAGCTCCTTTCAAATTTCGCCTTGGCAAAGGAGAAGTTATTGAAGGTTGGGATATTGGCCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTTGTAATTCCACCATCAATGACGTCTAAGAATGATGGAGACAATGCTGACATACCACCAAATTCATGGTTGGTTTATGACTTTGAACTGGTTAAAGTTCATTGA 1983 0.3923 MAFWGVEIKPGKPFSHQFDASKGRLHISMATLGLGSAITKSTLQCNVGNKSPIYLCSLYPGKTESLQLNLELEEDGKVVLSVIGPRSIHLCGYYLARGRYSNTIDESESYGEDIADTETERSDHSDEDDYDDSFIDDDGDPAVFPPSPISNEEEASYDSGRKSVKGSRRRLKKKYQMVESDDDDCLEDKKIVNDSMHAQSQEIVNEDSLPISSVCKNKASGRIFDQEMDDNVDREAIDAGNKDGDDHGNSVIETKLINDNVVLDSETHREAEPSDHLVDPCTVLDVGEIKKSKKKKKGKEKETKSSCNGHSTELGSAAQDEQNMNMTQGDLLVGNEEHQKQSDDKKTETTDKILPSSQVGQGQDEKPKRKRKERPKEETFVTADGASISNLVNPSQGTEHAINEDVKISDIVALPSTETDSQKRTKRKKKEHINKASHPESDNGNDEGTIQDNKANKETADSDSKVSEKKEQDQKLTIENSVDNGVHDNPDGNQSEVKKVKKKRKKSKSQGNEDVNSHVPVSIEETTEMMIVDGNNINMEDSEPSQVRTLENGLVVQELEIGTENGKIAALGKKISINYTGKLKENGVVVDSNAGKAPFKFRLGKGEVIEGWDIGLEGMRVGEKRRLVIPPSMTSKNDGDNADIPPNSWLVYDFELVKVH 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02947 660 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Car06g02947 660 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 395 660 - -
Car06g02947 660 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 276 - -
Car06g02947 660 MobiDBLite consensus disorder prediction 363 380 - -
Car06g02947 660 Gene3D Nucleoplasmin core domain 1 98 - -
Car06g02947 660 MobiDBLite consensus disorder prediction 383 402 - -
Car06g02947 660 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 569 657 IPR001179 GO:0003755
Car06g02947 660 MobiDBLite consensus disorder prediction 434 477 - -
Car06g02947 660 MobiDBLite consensus disorder prediction 308 335 - -
Car06g02947 660 MobiDBLite consensus disorder prediction 263 521 - -
Car06g02947 660 PANTHER PEPTIDYLPROLYL ISOMERASE 1 276 - -
Car06g02947 660 PANTHER PEPTIDYLPROLYL ISOMERASE 395 660 - -
Car06g02947 660 Gene3D - 522 660 IPR046357 GO:0003755
Car06g02947 660 SUPERFAMILY FKBP-like 522 659 - -
Car06g02947 660 MobiDBLite consensus disorder prediction 336 351 - -
Car06g02947 660 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 572 660 IPR001179 GO:0003755
Car06g02947 660 MobiDBLite consensus disorder prediction 107 173 - -
Car06g02947 660 MobiDBLite consensus disorder prediction 122 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02947 Car-Chr6 48735829 48747254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02947 572 657 Calmodulin-binding Proteins AT5G48570 41.379 1.96e-14 74.7