Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02925 ATGTATAAGGGGAGAATAGGAGGCAAAGCTCAGCTTGGATATGTTGAAACTGACCCTTCAGGTCGATATGGACGTTTGAGGGATGTCCTTGGCAAAGGAGCCATGAAGGTAGTGTATAGGGCATTTGATGAAGTCCTAGGAATAGAAGTGGCTTGGAACCAAGTCATGCTTGATGATGTCTTTCATTCACCAGATCAACTTCAACGCCTCTATTCAGAGGTTCATCTTCTAAAGAACTTGGATCATGACTCTATCATTACCTTTCATGATACTTGGATCGATGTCAATTGTAGAACTTTCAACTTTATCACTGAATTGTTCACTTCCGGCACCCTAAGAGAgtataGAAAGAAGTACCCTCGTGTAGATATAAGAGCAATAAAGAATTGGGGTCGCCAAATTCTAAGTGGTTTGGAGTATTTGCACAGCCATGATCCGCCAGTGATTCATAGAGACCTAAAGTGTGATAATATCTTTGTCAATGGTCATATGGGGAAGGTCAAGATTGGTGATTTAGGCCTTGCAGCTATTCTAAGTGGCTCTCAACATGCACATAGTGTCATAGGTACACCTGAATTTATGGCACCAGAATTGTATGAAGAGGACTATAATGAGCTGGTTGACATATACTCTTTTGGTATGTGTATGATAGAGTTGTTCACTTCGGAGTTCCCATACAACGAGTGCTCTAACCCTGCACAAATATACAAGAAAGTTACTTCTGGGAAGCTACCAGAAGCATTTTATAGGATCCAAGATTTAGAAGCCCAAAAGTTTGTTGGAAAATGTTTGGCAAATGTCTCAGAGAGGTTGTCAGCAAAGGAGCTCTTGTTGGACCCTTTTTTAGCCACGGACCAACTTGACTCATTACTGCCAACTCCAACATCACTTAGTAGACTCAATTTCACAACATCAAATCCTAAAGACAAACATTCATTGAATGATCAAACAAAGAGCACACACATGACAATCACAGGGACTATGAATGAAGAGGATGACACTGTTTTCCTTAAAGTAAAAATTTTCAATAAAAATGGAAACACAAGGAATATATATTTCCCGTTTGACACCATAAAGGACACTGCCATTGAGGTTGCAAATGAAATGGTCAAAGAACTAGAAATTAGTGACTTGGAACCATTAGAAATTGCTGAGATGATAGAAGAAGAGATATCAACTATAGTTCCAACATGGAGGGATTGTGACACTTACAAGTATCAAAGACAACATAGTTTTCAATATGAAGAAGAGGATGATATCAATAACCACCATCCTTTCTTCTCATCATCTCCTCGCTCTTCCTCACATGATTCTCTCCCAATGTTTTGTCCTTCCTATAACAATTCCTACTTTCGTGGGAACCAATACCCTTTTGCACAAGATGATCTATTTATGAATGATGATGCAAGTTCTCAAAGCTCAATGAACTCCTACAATTATTTCAATTTCCATTCCAACGACTCATGCAATGAAGATGAGCAACAAGGTTCAAGTTTTGCAAAAGGAGAAGAACCCCTTTGCTGCAATCCAAAAAGTAGCAACAAGTGGACAAGATTCTACCCTCAAGAAGAGGAAGTTGAAGCTGGAATCACCAAACAGTTTTGCAACATGAGAATGGattctcatactcacactcataaacatcatcatGGACCAAGGAATAGATGTCATAAGCTAACTAAGATTAATTCCTATGTTGATATTAGGAGACAACAACTGCAAAGAACACTGATGGAGGAGATGCAAAAGAGAAGGATGGCTAAAACTGTTGGTGCCATTGAGAACATTGGGTTTAAGAATCCAGAAGGAGATGGATCATTTTCTTGTTGA 1830 0.3842 MYKGRIGGKAQLGYVETDPSGRYGRLRDVLGKGAMKVVYRAFDEVLGIEVAWNQVMLDDVFHSPDQLQRLYSEVHLLKNLDHDSIITFHDTWIDVNCRTFNFITELFTSGTLREYRKKYPRVDIRAIKNWGRQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHMGKVKIGDLGLAAILSGSQHAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCMIELFTSEFPYNECSNPAQIYKKVTSGKLPEAFYRIQDLEAQKFVGKCLANVSERLSAKELLLDPFLATDQLDSLLPTPTSLSRLNFTTSNPKDKHSLNDQTKSTHMTITGTMNEEDDTVFLKVKIFNKNGNTRNIYFPFDTIKDTAIEVANEMVKELEISDLEPLEIAEMIEEEISTIVPTWRDCDTYKYQRQHSFQYEEEDDINNHHPFFSSSPRSSSHDSLPMFCPSYNNSYFRGNQYPFAQDDLFMNDDASSQSSMNSYNYFNFHSNDSCNEDEQQGSSFAKGEEPLCCNPKSSNKWTRFYPQEEEVEAGITKQFCNMRMDSHTHTHKHHHGPRNRCHKLTKINSYVDIRRQQLQRTLMEEMQKRRMAKTVGAIENIGFKNPEGDGSFSC 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02925 609 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Car06g02925 609 CDD STKc_WNK 22 282 - -
Car06g02925 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Car06g02925 609 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 601 - -
Car06g02925 609 Gene3D - 317 400 - -
Car06g02925 609 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02925 609 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02925 609 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Car06g02925 609 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02925 609 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 7 601 - -
Car06g02925 609 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02925 Car-Chr6 47814108 47820358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02925 12 419 MAP Kinase Kinase Kinase AT3G51630 69.007 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car06g02925 Pkinase 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02925 K08867 - gmx:100816187 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02925 06 47814108 47820358 Car06g02925 06 47814108 47820358 ECH
Car03g01392 03 59198630 59204159 Car06g02925 06 47814108 47820358 PCT