Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02921 ATGAGATGGGCAACTTGTTTGTCTTCTTTCCCAACTTCTGAATTATATCCCCTTCACCCTTCTTCTTCCTTTTCGCCTCAAACCAAATCAGAGAACGCGATATTCAAATCATCGCAAATCATTTTGCAGGTGTGCTGTTCATTATATGTTCTGATACTGGGACATTTGAAAGGGAATGCTGAAAGATGTATCGGATGTTTAGTCCAATATCCATATCTTTTATGTGTTCAAGTGACCGAGCTTCTTGCTTTGAGGAACAGAACCACTATACTTCGCGCAATTGGTTTATGCAAAACAGTGTTGCTAGAAATGGAACAAAAAGGAAGTGTGCTTATGCAACGATATGAAATAGGGAAATTATTAGGCCAAGGAACCTTTGCAAAAGTCTATCATGCAAGGAACCTCAAAAACGGAACTAGCGTGGCCATCAAAGTTATTGATAAAGTGAAGGTTTTGAAGGTTGGGATGATTGATCAGATTAAGTGTGAAATTTCAGTGATGAGACTAGTCAGGCATCCGCATGTTGTTGAGCTTTATGAGGTAATGGCAAGCAAAACCAAAATTTACTTTGTCATGGAGTATGTAAAAGGTGGCGAACTCTTCGACAAAGTATCGAAAGGAAAGCTCAAGCATGATGATGCTAGGAGATACTTTCAGCAATTGGTCAGTGCTGTTGATTACTGTCATAGCCGAGGTGTGTGTCATCGTGATCTAAAACCAGAAAACCTTCTGTTGGATGAGAATGGAAATTTGAAGGTCTCTGATTTCGGGTTAAGTGCACTTGCTCAATCTAAGCACCAAGATGGATTACTTCATACTACATGTGGCACCCCTGCTTACGTTGCTCCGGAAGTGATAAACCGAAAGGGATACGATGGGATTAAAGCTGATATATGGTCATGCGGGGTGATCTTGTATGTTCTATTGGCTGGTTTTCTTCCATTTAGAGATTCAAATCTTATGGAGATGTATAGGAAAATCGGTAAGGCAGAATTCAAGTTTCCTAACTGGTTTGCATCAGATGTACGCAGATTGTTGTCGAAAATATTGGATCCAAACCCAAAGACGAGGATATCATTGGCCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGGTTAGAGAAGCATATTGATACTAACAAAGAATACAAAGAACTACCTCCTCTAGATGCAGATGGAGTATTCGGAGCTTGTGAGAATGGAGATCATATCGAGCTGTCGAAACCTTGTAATAATCTGAATGCTTTCGATATCATCTCCTTTTCATCCGGCTTTGATTTGTCTGGTTTGTTTGAGGAGAAAGATCGAAAGACAGAAGTGCGGTTTACGTCTAACAAGCCTGCTTCAATCATCATCTCCAAGTTTGAAGAAATTTGCCAGAGTCTCGGGCTAAAAGTGAAGAAAAAAGGTGGAGGTTTGTTCAAGTTTGAAGGTTCAAAAGAAGGAAGGAAAGGACATTTGGGTTTTGATGCAGAGATTTTCGAGATCACCCCGGTTTTCCATCTAGTCGAGATGAAAAAGTCCGACGGTGACACATTGGAGTACCAAAAGCTTTTGAAAGAGAATGTTAGGCCTGCACTTAAGGACATTGTTTGGACATGGCAAGGAGAACAACCACAGCAATTGCAAAATGGAGTATTGCAGAAAGAGGAACCGCCTTCCCATTCGGGTGTATCAGAGGTTGTTTTACACTCATCTTCGTAA 1704 0.4049 MRWATCLSSFPTSELYPLHPSSSFSPQTKSENAIFKSSQIILQVCCSLYVLILGHLKGNAERCIGCLVQYPYLLCVQVTELLALRNRTTILRAIGLCKTVLLEMEQKGSVLMQRYEIGKLLGQGTFAKVYHARNLKNGTSVAIKVIDKVKVLKVGMIDQIKCEISVMRLVRHPHVVELYEVMASKTKIYFVMEYVKGGELFDKVSKGKLKHDDARRYFQQLVSAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAQSKHQDGLLHTTCGTPAYVAPEVINRKGYDGIKADIWSCGVILYVLLAGFLPFRDSNLMEMYRKIGKAEFKFPNWFASDVRRLLSKILDPNPKTRISLAKIMESSWFKKGLEKHIDTNKEYKELPPLDADGVFGACENGDHIELSKPCNNLNAFDIISFSSGFDLSGLFEEKDRKTEVRFTSNKPASIIISKFEEICQSLGLKVKKKGGGLFKFEGSKEGRKGHLGFDAEIFEITPVFHLVEMKKSDGDTLEYQKLLKENVRPALKDIVWTWQGEQPQQLQNGVLQKEEPPSHSGVSEVVLHSSS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02921 567 ProSiteProfiles Protein kinase domain profile. 115 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02921 567 Gene3D Transferase(Phosphotransferase) domain 1 105 403 - -
Car06g02921 567 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 105 547 - -
Car06g02921 567 SUPERFAMILY KA1-like 439 520 IPR028375 -
Car06g02921 567 CDD STKc_SnRK3 114 368 - -
Car06g02921 567 Gene3D Kinase associated domain 1, KA1 408 533 - -
Car06g02921 567 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Car06g02921 567 SUPERFAMILY Protein kinase-like (PK-like) 111 370 IPR011009 -
Car06g02921 567 SMART serkin_6 115 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02921 567 ProSiteProfiles NAF domain profile. 408 432 IPR018451 GO:0007165
Car06g02921 567 Pfam NAF domain 411 468 IPR004041 GO:0007165
Car06g02921 567 CDD CIPK_C 414 528 - -
Car06g02921 567 MobiDBLite consensus disorder prediction 545 567 - -
Car06g02921 567 Pfam Protein kinase domain 115 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02921 567 PANTHER - 105 547 - -
Car06g02921 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02921 Car-Chr6 47373815 47377316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02921 104 540 CBL-interacting serine-threonine protein kinases AT5G58380 66.079 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car06g02921 Pkinase 1.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02921 K07198 - gmx:100815651 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02921 06 47373815 47377316 Car06g02921 06 47373815 47377316 ECH