Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02888 ATGGATGCCACTCACTCAATGTTTTGTAACGATGATCTGATTAACCCTTTAAGCTCAATGGGCATGCAAGTGTCTTGCATTCTTGTTGTATCACATTTCTTCAACGTTGTCCTTAGGACCGTGGGCCAACCTGGACCCATAGCACAAATCCTGGCTGGGTTGGTATTAGGACCAATGTCTCATATTCCGTATATAAAAAAAACATTCTTTCCGGCCAGTTCCATAAATTACTATGAAGTTGTGTCTTTCTTCTGTCGCATAAACTTCATGTTTTTATTTGGCTTGGAGATGAATATTCACTACATAATGCACCATCTTCGTATGGTCACTTTGGTAGCATGTGGAGGTGCACTAACTGGTGGTATTTTTGGCCTATCAGTTTCCTTTTATTTGTATCAAGAATTAGATACCAATAGTACTTCCATGTATTATTTTTCCATAATCATTATGTTAGTTGTATCATACACAAGCTCCCCCATGGTTATTCGTTTGTCCTCAGAATTAAGGTTTGCGGCGTCGAACGTTGGCCGAATCGCGGTGTCTTCGGCGTTGATTACCGAAATGGGATGTGTGTTGTTGTTTAACGTGGCGGTTAGTTGGACAAAAGAAAACCACATTTCATATGGTTTTTATTGTACCATTGTTACTATTCTTGTTGTTTTAATAAACAAGAATTTAGCCGTTTGGTTAAATGGAAGAAATAGAAACCAAAAGTACCTAAAAGCCCCTGAGTTACTGTTCATACTATTTTTGCTTCTAACTAGCTCAATGATTATTGAAATTATGGGTTACAATAGCATTATTAGTTGTTTTATCATTGGTTTGTTGTTTCCTAAGGAAGGTAAAACAGCTAGAACATTGTTACATAAACTTGGTTATTCAATATATAACTTTGTACTTCCGGTATATTTTGGGTATTTGGGTTTACAATGTGACCTCATAAATGTCTTTAAGAGCTTGGATCGAACAACGAATTTAGCTATATTGATTTTGTTGAGCATTGGAAGCAAACTTGGTGGCACTCTCATAATTTGTCGTTACCTTCATATTCCAACTAGTGAAGGAATTTTTATTGGTTTCATATTGAACACTAGAGGTTATGCTGATTTGCTATTCATTGGTGCAGCAGCAAAGCATGTAATTACATTTGAAACAGAAGCTTACAATGTGTTACTAGTATCAATTGTATTGAACACAATAATATCAGGAATAATTGTGGCTTTTCTAGCAAGAGGGGAAGAGAAAATGTTTTCAACCAACCATACTGCAATTGAACCACAAAAGATGGAGGAAGACGAGCTTCGAACTTTGGCTTGTGTGTACGATCCTCGTCAAGTATCTGCAATATTTTCCACAATATTAGCAATACATGGTTCTAGAACTTCATTTTCCACCACTTATTTAATGCACTTAGTAGAGCTTGTGAAGAGGATCAAGACCAACTTATTATACCATGAAAAAGAAGACGCCGATCTTAGCGACGACGACGACTATGGTAGCAATGATGTGGTGGACATTAATAATGCCTTAGATGCCTTCACTGCAGACACAAAAATTTTAGTCCACCAAAAAAGAGCAGTTTCTTCTTTTAAAAGTTTGTATGAAGATGTTTGTAATGAAGCAGAAGATCTTCAAGTATCGATTATTTTACTTCCGTTTCACAAGCATCAACGCATCGATGGAAAACTAGAAAGTGGAAAAGAAGGTATAAGGACTACGAATCAGAAGATTCTTAGACATGCTCCTTGTTCTGTAGGTGTTATTATAGAAAGAGGACTTACTAAGGCCTCTGGTTTCTCAGAACTAACTGCATCAGAGGATATGCAAAATGTTGCAACACTTTTCTTTGGAGGTCCGGATGATCGTGAAGCTATTGCTTGGAGTGTACGCATCTCCGAATGCCCTCGCATTAACTTGACAATCATTAGATTTTTATTGGCTCCTTCTTCTTCGCCGCAGGAAAATGAACAGATTGAAAGAGTAGTACAATTTGAGGAAAAAGAAATTTTAATGTCGTTGTCGGCGGAAGAGACTGTGAATGAGATTGATAATACATTCATGGTTGATTTCTATAACCGGTATGTGACTTCAGGTCAAATTGGATATGTGGAAAATTTTGTGAAGGATGGAACACAAACAGTTGAATCTTTGAAAGAGATTGGGGATATGTACTCATTGTTTATAGTAGGAAAGGGTGGTAGAGGAATTAATTGTAGTTCATTAACAATAGGTATGAGTGATTGGGAAGAGTGTCCAGAACTTGGAACAGTTGGTGATGTTTTAGCTTCTTCAGAATTTGATATTCATGGATCAGTTTTGGTCATTCAACAACATCGAGATGTTAAAAAAGGTCTAACACATGATTAG 2367 0.3684 MDATHSMFCNDDLINPLSSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHIPYIKKTFFPASSINYYEVVSFFCRINFMFLFGLEMNIHYIMHHLRMVTLVACGGALTGGIFGLSVSFYLYQELDTNSTSMYYFSIIIMLVVSYTSSPMVIRLSSELRFAASNVGRIAVSSALITEMGCVLLFNVAVSWTKENHISYGFYCTIVTILVVLINKNLAVWLNGRNRNQKYLKAPELLFILFLLLTSSMIIEIMGYNSIISCFIIGLLFPKEGKTARTLLHKLGYSIYNFVLPVYFGYLGLQCDLINVFKSLDRTTNLAILILLSIGSKLGGTLIICRYLHIPTSEGIFIGFILNTRGYADLLFIGAAAKHVITFETEAYNVLLVSIVLNTIISGIIVAFLARGEEKMFSTNHTAIEPQKMEEDELRTLACVYDPRQVSAIFSTILAIHGSRTSFSTTYLMHLVELVKRIKTNLLYHEKEDADLSDDDDYGSNDVVDINNALDAFTADTKILVHQKRAVSSFKSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRTTNQKILRHAPCSVGVIIERGLTKASGFSELTASEDMQNVATLFFGGPDDREAIAWSVRISECPRINLTIIRFLLAPSSSPQENEQIERVVQFEEKEILMSLSAEETVNEIDNTFMVDFYNRYVTSGQIGYVENFVKDGTQTVESLKEIGDMYSLFIVGKGGRGINCSSLTIGMSDWEECPELGTVGDVLASSEFDIHGSVLVIQQHRDVKKGLTHD 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02888 788 Pfam Sodium/hydrogen exchanger family 27 410 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car06g02888 788 PANTHER CATION/H(+) ANTIPORTER 1 21 778 - -
Car06g02888 788 Gene3D - 19 418 IPR038770 -
Car06g02888 788 PANTHER CATION/H + ANTIPORTER 21 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02888 Car-Chr6 45838032 45842175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02888 11 788 Antiporter Super Family AT1G79400 38.295 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02888 - - gmx:100804522 1259.97