LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g02882	ATGGAAAGAGAGTTTGAAAAAGGGTACATAAAGAAAGGACCATGGAGTAGTGAAGAAGATGAAGTGTTATTAGAACATGTTAAGAAATATGGTTCAAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTTTGCCTCGAACTGGAAAATCTTGTCGATTAAGATGGGTTAACAAGCTTAGACCAAACTTGAAAACAGGGTGCAAGTTTTCAGCCGAGGAGGAAAGCGTGGTGATTGAGTTACAGAAGCAATTTGGGAACAAATGGGCCAAAATTGCTGCATGTTTGGAAGGGAGAACAGACAATGATGTGAAGAACTTTTGGAGTAGCAGGAGAAAAAGGTTGGAGAGGACATTGGCAAGGACACCATCACCTCCATTTAAGCAGCAGAAAAACAAAGGAAAAGATATGCTTATTCTTAATAATAATCAAGTAAAAGTTGAAAAGGTTCCTGAACGTGGATCCAATAAGCTGGAGGAAAACCTAACTTACCCCATTTCTTATATGGGAAACAAAGAGGTATTCAATATGATCAACCTTTCAGATTTAACAAAATCAAACTACCAAAATATAGAAAATGACCTTAATACAGTTGAGGTTGAAGTCACTCCACTTCACACAGTACCATCATTTGAGTCTTCATCAGGCTACAACTTTCCACTGCTCCCTGAATCACAAATGGACTTTTCACTATTTCCAGAGTGCCAAAACCTTGTTCAAGAGCCATTTGATTCCAATTTTATGGACATGTTTGAGCAGGAAAAATGTTCAGATTGTGTGTGGAGTCAGAAGCTTGAGACCAAGTTGCCAACTCTTGGATTGGAAGGAAATTCTCAGAGTACAAATTCAAATTGTTTCTTTAAGGACTTCCCAACTGAGATTTTTGAATACTTTGAGGATATTTCAACTTAA	909	0.3795	MEREFEKGYIKKGPWSSEEDEVLLEHVKKYGSRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEESVVIELQKQFGNKWAKIAACLEGRTDNDVKNFWSSRRKRLERTLARTPSPPFKQQKNKGKDMLILNNNQVKVEKVPERGSNKLEENLTYPISYMGNKEVFNMINLSDLTKSNYQNIENDLNTVEVEVTPLHTVPSFESSSGYNFPLLPESQMDFSLFPECQNLVQEPFDSNFMDMFEQEKCSDCVWSQKLETKLPTLGLEGNSQSTNSNCFFKDFPTEIFEYFEDIST	302

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Car06g02882	302	ProSiteProfiles	Myb-like domain profile.	7	59	IPR001005	-
Car06g02882	302	Pfam	Myb-like DNA-binding domain	68	108	IPR001005	-
Car06g02882	302	Pfam	Myb-like DNA-binding domain	12	57	IPR001005	-
Car06g02882	302	Gene3D	-	5	65	-	-
Car06g02882	302	ProSiteProfiles	Myb-like domain profile.	68	111	IPR001005	-
Car06g02882	302	PANTHER	MYB TRANSCRIPTION FACTOR	1	301	-	-
Car06g02882	302	Gene3D	-	67	138	-	-
Car06g02882	302	SMART	sant	11	61	IPR001005	-
Car06g02882	302	SMART	sant	65	113	IPR001005	-
Car06g02882	302	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	64	115	IPR017930	-

Showing 1 to 10 of 15 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car06g02882	Car-Chr6	45653098	45655274	Transposed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car06g02882	4	302	MYB Transcription Factor Family	AT3G60460	39.091	3.42e-61	194

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Car06g02882		Myb_DNA-binding	2e-12	CL0123

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g02882	K09422		-	gmx:100793689	416.001

Showing 1 to 1 of 1 entries