Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02874 ATGTCGCTCAACATGAAAACCCTAACCCAAGCACTAGCAAAAACCGCCGCAGTCATCGAAAAAACCGTTCAAACAACAGTCCAAGACGTCACAGGTCCAAAACCACTTCACGATTACGACCTCCTCGATCAGATCGGTTCCGCAGGCCCGGGCTTAGCCTGGCGACTTTACTCCGCCCGTGCCCGTGATCCTTCACGCCAGCATCAGTATCCTGTTGTATGCGTTTGGGTGTTGGATAAACGGGCTTTATCTGAGGCCCGAATGCGTGCGGGACTTACTAAAGCGGCTGAGGATTCGTTTTTAGATTTGATTCGGAAGGATGCGGCTAAGCTTGTTAGACTTAGGCATCCTGGAATTGTTCATGTTGTTCAGGGACTCGATGAGAGTAAGAATGCAATGGCCATGGTTACCGAACCTTTGTTTGCTTCTGTTGCTAATACTCTTGGGAATCTTGATAATGTTCCTAATGTTCCTAAAGACCTGAGGGGAATGGAAATGGGACTGTTGGAGGTGAAACATGGTTTACTTCAGATAGCGGAGTCGTTGGATTTTCTCCACAACCATGCTCATCTTATTCATGGAGCTATATCACCTGAGAATGTTTTTATCACATTGAGTGGAGCTTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTTCTTCTCAGAACCCTGGTGACTCATCTAATCTGCATGCCTTCCATTATGCTGAATATGACATTGAAGACTCTGTTTTGCCACTTCAGCCATCACTTAATTACACTGCTCCTGAGATGGTGAGGAGCAATGCTTCTTCAGCTGGGTGCTATTCTGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCTCGCAAGCCTTTGTTTGACTGCCACAACAATGTCAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCATCGGATCTGGTTCCTGACTTGCAAAAGATGCTCTCTTCAAATGAATCTTTCAGGCCAACTGCTATGGATTTTACAGGGTCACAATTTTTTCGAAATGACACTAGGTTACGTGCTCTGCGTTTCCTGGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGGCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTGGTGATACAGCCGTTGATTCTGCCAATGGTTCTAACCATTGCGGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCCCTTGTCCCTGTCTTAAGCACTGCTTCGGGTGATACAATGCTACTACTTCTGAAGCACGCCGAGCTAATAATAAACAAGACTAGTCAAGAGCATTTAATTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCACGTTTACAAGAAGAGGTCCTAAAAAAGTCTGTATCCCTGACTAAACAACTTGATGCCCAGTTGGTGAAACAAGTGATTTTGCCCCGTGTTCATGGACTAGCGCTCAAAACAACAGTTGCTGCGGTTAGAGTCAATGCTTTGCTGTGCCTAGGAGACATGGTTAATCGACTTGATAAGCATGCTGTCCTGGAAATCTTGCAAACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCCCCAACCCTTATGTGTACCCTTGGGGTTGCAAACTCTATTTTTAAGCAGTATGGTGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTATGCCACTCCTGACTGCTCAACAACTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGAATATGCTCCAGAAGATAGAAGAGAAGCGAGGAGTTACTGTGACCGATTCCGGAATCCCTGAGGTAAAACTATCTCCTGCAGTTAATGGCCTGCAGGTGGAAGCTCCGAGGACAAGCAGCAGCGTTGTTCTTACGCCAACAAAAAGCAGCTCATCTTGGGATGCAGATTGGGGTCCTCCCAAAGCAACGCGAACTGCCAATTCTGTCCAGAACACTATCAATAATTCTAGTCAATCTGTGGTAGGCAACCCTGTTGGTCAAGTTACATCTTTACAAAATAATTTGTCCTTATCTGGTGTATCTAATCAGCAAACAGCCAAGTCATGTCCTTCGGTAGATTTAGAGTGGCCGCTTCGTGCATCATCCGTTGTTACGTCACAATTTGGTGATACCGTAAGGCAAACGATTCCACCAGGAACCTCATCCACATATAATGTTGAAGATGATGATCCTTTTGCTGATTGGCCTCCGCGTACTAGTGGCTCATTATCTGGTGGATCTGGAAATTCCAACAATGGTACTTTAGGAATGTCACCAAACAAATTGGGGCATAATTCAAGGACAAGCAATTCAAGCAATCTTGGTATCCAAGCTAGCAACAATTGGTCTGTCAATTCCCAAAGTTCGTCTATCGGTAACTCGAATAATGGCATTGAACCTCCAAACTCTCTTGGGTTCCTAAAACAAAGTCAGGCTTTTCCAGCATCAAACGCTGTTTCATCATATACTAATAATGTTAAATCAACTGATCTTGGATCAATATTTTCTTCCAACAAGAATGAACAAATTGCACCTAGACTCGCACCACCCCCTTCAACCACGTTGGGTAGAGGACGGGGAAGAGGGAGAGGAGCTACTTCAACCAAACAACCTTCTCATACCAAGTCAAGCACTGAGCAGCCACCCCTTTTGGATTTGTTGGGGTAG 2757 0.4418 MSLNMKTLTQALAKTAAVIEKTVQTTVQDVTGPKPLHDYDLLDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRALSEARMRAGLTKAAEDSFLDLIRKDAAKLVRLRHPGIVHVVQGLDESKNAMAMVTEPLFASVANTLGNLDNVPNVPKDLRGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHGAISPENVFITLSGAWKLGGFGFAISSSQNPGDSSNLHAFHYAEYDIEDSVLPLQPSLNYTAPEMVRSNASSAGCYSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQKMLSSNESFRPTAMDFTGSQFFRNDTRLRALRFLDHMLERDNMQKSEFLKALADMWKDFDSRVLRYKVLPPLCAELRNVVIQPLILPMVLTIAESQDKNDFEQSTLPALVPVLSTASGDTMLLLLKHAELIINKTSQEHLISHVLPMIVRAYDDNDARLQEEVLKKSVSLTKQLDAQLVKQVILPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVLEILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKNMLQKIEEKRGVTVTDSGIPEVKLSPAVNGLQVEAPRTSSSVVLTPTKSSSSWDADWGPPKATRTANSVQNTINNSSQSVVGNPVGQVTSLQNNLSLSGVSNQQTAKSCPSVDLEWPLRASSVVTSQFGDTVRQTIPPGTSSTYNVEDDDPFADWPPRTSGSLSGGSGNSNNGTLGMSPNKLGHNSRTSNSSNLGIQASNNWSVNSQSSSIGNSNNGIEPPNSLGFLKQSQAFPASNAVSSYTNNVKSTDLGSIFSSNKNEQIAPRLAPPPSTTLGRGRGRGRGATSTKQPSHTKSSTEQPPLLDLLG 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02874 918 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 917 - -
Car06g02874 918 MobiDBLite consensus disorder prediction 649 666 - -
Car06g02874 918 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02874 918 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02874 918 Gene3D - 348 621 IPR011989 -
Car06g02874 918 MobiDBLite consensus disorder prediction 740 833 - -
Car06g02874 918 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02874 918 MobiDBLite consensus disorder prediction 895 911 - -
Car06g02874 918 MobiDBLite consensus disorder prediction 867 918 - -
Car06g02874 918 MobiDBLite consensus disorder prediction 770 833 - -
Car06g02874 918 MobiDBLite consensus disorder prediction 649 675 - -
Car06g02874 918 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Car06g02874 918 MobiDBLite consensus disorder prediction 740 757 - -
Car06g02874 918 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 917 - -
Car06g02874 918 CDD PK_SCY1_like 45 346 - -
Car06g02874 918 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Car06g02874 918 Gene3D Transferase(Phosphotransferase) domain 1 159 347 - -
Car06g02874 918 SUPERFAMILY ARM repeat 312 608 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02874 92 335 AGC Kinase Gene Family AT3G10540 23.387 2.68e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Car06g02874 Pkinase 5.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02874 K17541 - gmx:100796211 1441.02