Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02872 ATGATTGCTTTGTTAATGTTTGTTGAATTTGTGAAGGGGTGTGATGCTTCTATGTTGCTTGATGACACACCAAGTATGCTTGGAGAGAAATTGGCTCTTTCGAATATAAATTCGCTTAGATCATTTGAAGTTATTGATGAGGTTAAGGAGGCTTTAGAGAAGGCTTGTCCAGGAGTTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCTAACTGGGAGGTGAGACTAGGAAGATTGGATAGCTTGACAGCTAGTCAAGATAACTCAAGCAATATCATGCCAAGTCCGAGATCCAATGCAACCACTCTCATCAATCTCTTCCAGAAATACAACCTATCTGTCAAAGACCTTGTAGCACTCTCAGGATCTCACTCGATCGGCAAAGGTCGTTGTTTTTCAATCATGTTCAGACTATACAATCAATCCGGTAGTGGAAAGCCTGATCCTGCCATTGATCCTGGCTTTAGAAATGAGCTTAACAAACTATGTCCACTAGATGTTGATCAAAATGTGACAGGGAACCTTGATTCAACTCCTGTGATTTTTGATAACCAATATTTCAAGGACTTGGTTGCTGGGAGAGGATTTCTCAACTCTGATCAAACACTTTTCACTTTCCCTCAAACAAGAGAGTTTGTGAGTTTCTATAGTAGAGATCAAACTGAGTTTTTCAAAGCATTTGTAGAAGGGATGTTGAAAATGGGTGACTTGCAGTCCGATCGCCCTGGCGAGGTTAGGAGGAATTGCAGAGTCGTCAATCCTCGTCCCGCTCATTTCCTTTCTGAACACAAGATGCAGAATAATGATAAATCAATGTAA 849 0.4099 MIALLMFVEFVKGCDASMLLDDTPSMLGEKLALSNINSLRSFEVIDEVKEALEKACPGVVSCADIIIMASRDAVALTGGPNWEVRLGRLDSLTASQDNSSNIMPSPRSNATTLINLFQKYNLSVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIDPGFRNELNKLCPLDVDQNVTGNLDSTPVIFDNQYFKDLVAGRGFLNSDQTLFTFPQTREFVSFYSRDQTEFFKAFVEGMLKMGDLQSDRPGEVRRNCRVVNPRPAHFLSEHKMQNNDKSM 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02872 282 PANTHER PEROXIDASE 72-RELATED 10 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 SUPERFAMILY Heme-dependent peroxidases 10 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 ProSiteProfiles Plant heme peroxidase family profile. 1 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 Gene3D - 10 263 - -
Car06g02872 282 Pfam Peroxidase 9 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Haem peroxidase superfamily signature 60 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Haem peroxidase superfamily signature 78 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Haem peroxidase superfamily signature 126 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 CDD secretory_peroxidase 10 262 IPR033905 GO:0004601|GO:0042744
Car06g02872 282 ProSitePatterns Peroxidases proximal heme-ligand signature. 126 136 IPR019793 -
Car06g02872 282 Gene3D Peroxidase, domain 2 104 244 - -
Car06g02872 282 PRINTS Plant peroxidase signature 40 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Plant peroxidase signature 59 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Plant peroxidase signature 78 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Plant peroxidase signature 125 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Plant peroxidase signature 199 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PRINTS Plant peroxidase signature 239 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02872 282 PANTHER PEROXIDASE 17 10 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02872 Car-Chr6 45219204 45220970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02872 10 270 Peroxidase AT2G22420 75.862 9.65e-153 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02872 K00430 - gmx:100796737 451.825