Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02871 ATGTTTTTCTTTCtcattttcgtcataaacatactcatactcacaacatcatcatcatcatcaGATCTTCGACCTGGGTTTTACTCAAATACATGTCCGAATGCTGAAATCATTGTCAGAGATGTCATGAAAAAAGCCCTTATAAGAGAACCTAGAAGTGTTGCCTCTATTATGCGCTTTCAATTTCATGATTGCTTTGTTAATGGGTGTGATGCTTCTATGTTGCTTGATGATACACCAAGTATGCTTGGAGAGAAATTGGCCCTTTCGAATATAAATTCGCTTAGATCATTTGAAGTTGTTGATGAGGTTAAGGAGGCTCTAGAGAAGGCTTGTCCAGGAGTTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCTGACTGGGAGGTGAGACTAGGAAGATTGGATAGCTTGACAGCTAGTCAAGATAACTCAAGCAATATCATGCCAAGTCCGAGATCCAATGCAACCACTCTCATCAATCTCTTCCAGAAATACAACCTCTCTGTCAAAGACCTTGTAGCACTCTCAGGATCTCACTCGATCGGCAAAGGTCGATGTTTTTCAATCATGTTCAGACTATACAATCAATCCGGTAGTGGAAAGCCTGATCCTGCCATTGATCCTGCTTTTAGAAATGAGCTTAACAAACTATGTCCACTAGATGTTGATCAAAATGTGACAGGGAACCTTGATTCAACTCCTGTGATTTTTGATAACCAATATTTCAAGGACTTGGTTGCTGGGAGAGGATTTCTCAACTCTGATCAAACACTTTACACTTTCCCTCAAACAAGAGAGTTTGTGAGTTTCTATAGTAGAGATCAAACTGAGTTTTTCAAAGCATTTGTAGAAGGGATGTTGAAAATGGGTGACTTGCAGTCCGATCAACCTGGCGAGGTTAGGAGGAATTGCAGAGTCGCCAATCCTCGTCCCGCTCATTTCTTTTCTGAACACAAGATGCAAAATCCATAA 1005 0.39 MFFFLIFVINILILTTSSSSSDLRPGFYSNTCPNAEIIVRDVMKKALIREPRSVASIMRFQFHDCFVNGCDASMLLDDTPSMLGEKLALSNINSLRSFEVVDEVKEALEKACPGVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLTASQDNSSNIMPSPRSNATTLINLFQKYNLSVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIDPAFRNELNKLCPLDVDQNVTGNLDSTPVIFDNQYFKDLVAGRGFLNSDQTLYTFPQTREFVSFYSRDQTEFFKAFVEGMLKMGDLQSDQPGEVRRNCRVANPRPAHFFSEHKMQNP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02871 334 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 CDD secretory_peroxidase 23 317 IPR033905 GO:0004601|GO:0042744
Car06g02871 334 PANTHER PEROXIDASE 17 10 320 - -
Car06g02871 334 SUPERFAMILY Heme-dependent peroxidases 23 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PANTHER PEROXIDASE 72-RELATED 10 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 Pfam Peroxidase 39 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 Gene3D - 26 319 - -
Car06g02871 334 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 Gene3D Peroxidase, domain 2 160 300 - -
Car06g02871 334 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g02871 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02871 Car-Chr6 45059249 45061232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02871 7 322 Peroxidase AT2G22420 74.051 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02871 K00430 - gmx:100796737 536.184