Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02859 ATGAAGAATTCCTCAATTTCACTTCACTATAATCACTACACCGTTAACCTAATTGATTCCCTTGGACACATCGATTTCTGCGGCGAGGTATCCACGGCGGTGCGTCTCTCCGATGGTGCACTTCTATTAGTTGACGTTGTTGAAGATGTTGATTTTCTTCTCTCTGGCGGGACTGCCGCTGGTGGTGAGGTTATGGAGGATAATGATGATGTTGAAGATGTTTTTCAGCCTCAGAAAGGGAATGTAGTTTTTGCTTGTGCTTTAGATGGTTGGGGTTTTGGAATTCATGAATTTGCTGAAATTTATGCTTCAAAGCTTGGGGCTAGTGTTAGTGCATTACAGAAGGCTTTGTGGGGTCCACGGTATTTTAATCCGTTGATGAAGATGATTGTTGGGAAGAAAGGGATTGGTGGTGGTGGGAAGGCTAAACCTATGTTTGTTCAGTTTGTGTTGGAGCCTTTGTGGCAGGTTTGTCAGGGTGCACTTGAAGGTGATAAAGGGTTAATTGAGAAGGTTATTAGGTCTTTTAATTTGCAGGTTCCGGCGCGAGAGTTGAGGAATAAGGATGCTAAGGTTGTGTTTCAATCTGTTATGAGCCGTTGGCTTCAGCTTTCGGATGCTATTTTGTCGATGGTGGTTAAGTGTTTGCCTGATCCTGTAGCTGCGCAGGGGTCTCGGATATCACGGTTGATTCCGCAGGGTGAGGAGGGGAGACAATATTAA 723 0.4467 MKNSSISLHYNHYTVNLIDSLGHIDFCGEVSTAVRLSDGALLLVDVVEDVDFLLSGGTAAGGEVMEDNDDVEDVFQPQKGNVVFACALDGWGFGIHEFAEIYASKLGASVSALQKALWGPRYFNPLMKMIVGKKGIGGGGKAKPMFVQFVLEPLWQVCQGALEGDKGLIEKVIRSFNLQVPARELRNKDAKVVFQSVMSRWLQLSDAILSMVVKCLPDPVAAQGSRISRLIPQGEEGRQY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02859 240 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 1 50 - -
Car06g02859 240 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 68 232 - -
Car06g02859 240 Gene3D - 2 52 IPR027417 -
Car06g02859 240 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 50 - -
Car06g02859 240 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 68 232 - -
Car06g02859 240 Pfam Elongation factor Tu GTP binding domain 2 51 IPR000795 GO:0003924|GO:0005525
Car06g02859 240 Gene3D Yeast translation eEF2 (G' domain) 95 202 - -
Car06g02859 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 217 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02859 Car-Chr6 44212627 44214104 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02859 1 50 Eukaryotic Initiation Factors Gene Family AT3G22980 74.000 5.60e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02859 K14536 - pvu:PHAVU_003G003900g 276.174