Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02858 ATGGTGATTGTGGTGATGTTGAGGAAACAAATGTTTAGAGACATAATTAAAGAGATTCTTAATTTAGGAGGTAGAAACAACGTTGGTGAATTTTTGGGATTTTTAAGATGGTTTGATTTGGATGGTTTGGAGAAGAGGCTTAAGACGATTGACACAAAAATTCGCAACATATGCATCCTAGCACACGTAGACCGCGGCAAAACAACGCTGGCCGACCAACTCATTGCAACCGCCGGTGGAGGCATGGTTCATCCAAAAGTAGCCGGACGAGTCCGCTTCATGGACTACCTCGACGAAGAATAG 303 0.4356 MVIVVMLRKQMFRDIIKEILNLGGRNNVGEFLGFLRWFDLDGLEKRLKTIDTKIRNICILAHVDRGKTTLADQLIATAGGGMVHPKVAGRVRFMDYLDEE 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02858 100 Pfam Elongation factor Tu GTP binding domain 53 100 IPR000795 GO:0003924|GO:0005525
Car06g02858 100 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 51 100 - -
Car06g02858 100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 100 IPR027417 -
Car06g02858 100 Gene3D - 42 100 IPR027417 -
Car06g02858 100 PANTHER ELONGATION FACTOR-LIKE GTPASE 1 51 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02858 Car-Chr6 44212108 44212611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02858 53 100 Eukaryotic Initiation Factors Gene Family AT3G22980 77.083 4.08e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02858 K14536 - pvu:PHAVU_003G003900g 89.7373