Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02846 ATGAAGCAAGATCAATTCATCAACCTACCTTTATTTCTTGTTCTCTTTGGTCCATTCCTAGTGATCTCACAAAACCAACCTTTCAATGAAGATATGTTAGGATTAATAGTTTTCAAAGCAGGTCTAGAAGATCCAAAAAACAAACTCTCAACTTGGAATGAAGATGATTATAGTCCTTGCAATTGGGATGGTGTAAAATGTGACCCTTCAACAAATAGAGTGTCTTCTCTTATCCTTGATGGTTTCTCTCTTTATGGACACATTAATAGAGGCCTTATGAGATTGCAGTTCCTTCAAATTCTTTCCCTCTCTAGAAATAACTTCACAGGGACTATAAAAAATGACCTTCTTACCCTTTGGAATCTAAAAGTTGTTGACTTGAGTGAAAACAATCTCTTTGGAACAATCCCTGATGGATTTTTTCAACAATGTTGGTCTCTAAGAGTTTTGTCATTTTCTAAAAACAATCTCACAGGTAAAATTCCTGATTCTTTAACCTCATGCTTCTCATTAGCAACTTTGAATTTTTCATCAAATCAACTATGTGGTGAATTACCATATGGAATGTGGTTTCTTAGAGAACTACAATCACTTGATCTTTCAAATAACTTGATTAAAGGAAATATTCCTGAAGGGTTTCAAAATTTATATGATTTGAGAGAGTTAAGGGTAGGGAAGAATCTCTTCACTGGTAAGATTCCTGAGAGTGTTGGAAACTGTTTGCTTTTGAAGTTGATCGATTTCAGTGATAATTTTCTATCTGGAAAATTTCCTGAGTCAATACAAAGATTAACCTCATGCACATTTCTAAGTTTGCAAGGGAATTCTTTCACAGGAGGAATTCCACATTGGATTGGAGAATTGATAAATCTAGAGATATTGGATCTTTCTGAAAATAGATTTTCTGGTTGGATTCCAAATTCTATTGGAAATCTTGAATCACTTAGTAGATTGAACCTTTCGAGGAATCATATCACCGGAAATTTACCTGAAACAATGGTGAACTGCATTAAGCTTTTGAGTCTTGATGTTAGTCACAATCATTTGAAAGGAATTATTTCTTCATGGTTATTTAGAATTGGTATACAAAGTAATAATAGTAAGAGGAATTCTAGTTCATTTTCTTCTGTTTATTATTATTATGGACTTCAAGTTTTGGATTTGTCATCAAATGCATTTTTTGGTCAAATTCCATTTGGGATTGGAGGTCTTAGTAGCTTGCAAACATTGAATTTATCCACCAACAATATCTATGGTTTTATTCCAGTGAGTGTGAGAGAGCTTAAAAGTTTGTACATTCTTGATTTGAGTCACAATGAGCTTAATGGAAGCATTCCTGATGAAATTGAAGGGGTAATTTCACTTACTGAATTGAGGCTTCAAAGGAATTTCTTAGGTGGAAGAATTCCAGTTCAAATTGCAAAATGTTCAGCACTAAGATCATTGAATCTTGCACACAACAAGCTTAATGGTTCAATCCCTGCATCAATTGCAGAGCTAACAAATCTTCAGTATGCAGATTTATCATATAATAAACTCTCTGGAACCTTACCTAAGGAACTCACAAATCTTACACAACTTTTCTCATTTAATGTTTCCTATAACCATCTCCAAGGTGAATTACCAGTTGGTGGAATCTTTAATAAAATCTCTCCCTCATTTGTTTCTGGAAATCCCTTGTTGTGTGGTTCTGTTGTTAATCATTCATGTCCATCTTTCCATCCAAAACCAATTGTTTTAAACCCTAATTCAAATTGCTCCAACTCAAGATCTTCATTACAAAACCATCATCATAAGATAACTCTTAGTATCTCTGTCTTTAttgctattggtgcagctatttctattgttgttggtgttgttgctgttactgtgttAAATATTCATGTGAGATCTTCAATGTCACATTCTGATCCTCCATTTGCTTTATCTGGTGGTGAGGACTGTAGTTTTTCGCCTTCTAAAGATCCAAATTGTGGAAAACGTGTTATGTTTTCTGGTGATGTTGTTGATTTTGTTGATGAGGCTCATAACCTTAACATAGAGAGCGAAATTGGTGGCGGCGGATTTGGAATTGTTTATTATGTTGTACTTCGAGATGGGAGCTCTGTTGCAATCAAGAAGCTTATAGTGTCAAGTTTGACTAAGTCTCAAGAAGATTTTGTGAGGGAAGTTAAAAAGCTTGGTGAGATTAGGCATCATAATCTTGTGGTCATTGAAGGTTATTATTGGACTTCATCATCGCAACTTATTATTTATGAGTACTTGTCTAGAGGGAATTTGAATAAGCTTTTACATGATGATCATAGCAAAATTGTGTTTACTTGGAGGCAAAGGTTCAAGATTATTTCAGGTATAGCAAAAGGGTTGGCTTATTTACACCAAATGAACATAACCCATTATAATATAAAATCAACAAATGTTTTCATTGATTTTAATGATGAACCAAAAATAGGAGACTTTGGTCTGTTGAATCTATTTCCAATGCTAGACCATTGTGTTTTGAGTAGCAAAGTTCAAAGTGCACTTGGATACATGGCTCCCGAGTTTGCGTGCCGAACGGTTAACATAACCGAAAAATGTGACATATATGGTTTTGGAGTTTTGGTACTAGAAGTTGTGACTGGAAAAAAACCTGTAGAATATATGGAGGATGATGTGGTTGTTTTATGTGACATGGTGAGGAGTTCATTGGAGGATGGAAAAATTGAGCAGTGTATTGATGAGAAACTTTTGGGTGATTTTTCTGTAGAGGAAGCAATGCCTGTGATTAAATTGGGATTGGTTTGTGCATCAAAAGTACCATCGAGTCGTCCCGATATGGCTGAGGTTGTCAACATATTAGAGTTGATTCAATGCTCTTCGGAAGGACAACAAGAGGATTTACAATGA 2892 0.3416 MKQDQFINLPLFLVLFGPFLVISQNQPFNEDMLGLIVFKAGLEDPKNKLSTWNEDDYSPCNWDGVKCDPSTNRVSSLILDGFSLYGHINRGLMRLQFLQILSLSRNNFTGTIKNDLLTLWNLKVVDLSENNLFGTIPDGFFQQCWSLRVLSFSKNNLTGKIPDSLTSCFSLATLNFSSNQLCGELPYGMWFLRELQSLDLSNNLIKGNIPEGFQNLYDLRELRVGKNLFTGKIPESVGNCLLLKLIDFSDNFLSGKFPESIQRLTSCTFLSLQGNSFTGGIPHWIGELINLEILDLSENRFSGWIPNSIGNLESLSRLNLSRNHITGNLPETMVNCIKLLSLDVSHNHLKGIISSWLFRIGIQSNNSKRNSSSFSSVYYYYGLQVLDLSSNAFFGQIPFGIGGLSSLQTLNLSTNNIYGFIPVSVRELKSLYILDLSHNELNGSIPDEIEGVISLTELRLQRNFLGGRIPVQIAKCSALRSLNLAHNKLNGSIPASIAELTNLQYADLSYNKLSGTLPKELTNLTQLFSFNVSYNHLQGELPVGGIFNKISPSFVSGNPLLCGSVVNHSCPSFHPKPIVLNPNSNCSNSRSSLQNHHHKITLSISVFIAIGAAISIVVGVVAVTVLNIHVRSSMSHSDPPFALSGGEDCSFSPSKDPNCGKRVMFSGDVVDFVDEAHNLNIESEIGGGGFGIVYYVVLRDGSSVAIKKLIVSSLTKSQEDFVREVKKLGEIRHHNLVVIEGYYWTSSSQLIIYEYLSRGNLNKLLHDDHSKIVFTWRQRFKIISGIAKGLAYLHQMNITHYNIKSTNVFIDFNDEPKIGDFGLLNLFPMLDHCVLSSKVQSALGYMAPEFACRTVNITEKCDIYGFGVLVLEVVTGKKPVEYMEDDVVVLCDMVRSSLEDGKIEQCIDEKLLGDFSVEEAMPVIKLGLVCASKVPSSRPDMAEVVNILELIQCSSEGQQEDLQ 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02846 963 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 953 - -
Car06g02846 963 SUPERFAMILY L domain-like 257 586 - -
Car06g02846 963 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Car06g02846 963 PRINTS Leucine-rich repeat signature 339 352 - -
Car06g02846 963 PRINTS Leucine-rich repeat signature 428 441 - -
Car06g02846 963 Gene3D Transferase(Phosphotransferase) domain 1 756 962 - -
Car06g02846 963 Pfam Leucine rich repeat 383 441 IPR001611 GO:0005515
Car06g02846 963 Pfam Leucine rich repeat 454 513 IPR001611 GO:0005515
Car06g02846 963 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Car06g02846 963 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Car06g02846 963 Gene3D Ribonuclease Inhibitor 309 576 IPR032675 -
Car06g02846 963 SMART LRR_typ_2 404 427 IPR003591 -
Car06g02846 963 SMART LRR_typ_2 312 336 IPR003591 -
Car06g02846 963 SMART LRR_typ_2 192 215 IPR003591 -
Car06g02846 963 SMART LRR_typ_2 428 452 IPR003591 -
Car06g02846 963 SMART LRR_typ_2 288 311 IPR003591 -
Car06g02846 963 SMART LRR_typ_2 500 524 IPR003591 -
Car06g02846 963 SMART LRR_typ_2 119 143 IPR003591 -
Car06g02846 963 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Car06g02846 963 Pfam Protein kinase domain 681 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02846 963 Gene3D Phosphorylase Kinase; domain 1 664 755 - -
Car06g02846 963 Gene3D Ribonuclease Inhibitor 244 308 IPR032675 -
Car06g02846 963 Gene3D Ribonuclease Inhibitor 188 243 IPR032675 -
Car06g02846 963 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 953 - -
Car06g02846 963 SUPERFAMILY L domain-like 47 355 - -
Car06g02846 963 CDD STKc_IRAK 685 951 - -
Car06g02846 963 SUPERFAMILY Protein kinase-like (PK-like) 676 946 IPR011009 -
Car06g02846 963 ProSiteProfiles Protein kinase domain profile. 679 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02846 963 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Car06g02846 963 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02846 Car-Chr6 43093011 43101757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02846 21 960 Receptor kinase-like Gene Family AT3G56370 58.923 0.0 1054
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Car06g02846 Pkinase 6.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02846 - - gmx:100791204 1393.64