Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02844 ATGGAAACTTCAACCACCCTCACCGGATTACTCCAATCCGTTGCCAAAAAATTCCCCTCCCGGCGAGCCATCTCCGTCGCCGGAAAATTCGACCTCACTCACTCGCGCCTTCATGAATTAGTCGATTCCGCCGCCGCTCATCTGATCTCCGCCGGAATCAAACCAAACGACGTCGTCGCCCTAACCTTCCCAAATACCATCGAATATGTTGTATTGTTTTTAGCCGTAATTCGAGTTCGAGCCACAGCCGCGCCATTAAACGCAGCTTATACATCGGAAGAATTCGAGTTTTATTTATCCGACTCAGAATCAAAGCTTCTATTAACACCGTCAGAAGGTAACGAGCCGGCTCAAGCCGCAGCTTCAAAGCTCAACATTCCTCTCGGCTCGGCTTCACTAATTCAAATCGAAGGAGAACAACAACAAACCAAACTAAAATTCTCGATTAACCAACCCGAGTCAGACTTAATCTCCAACCCAGTTAACTCGGTTACCGAACTCATTAACGAACCACCCGACGTGGCACTTTTCCTCCACACATCAGGAACCACGAGTCGTCCCAAGGGGGTCCCACTGAGTCAACACAATCTAGTTTCATCGGTTAAAAACATCGAATCGGTTTACCGACTCAGTGAGTCAGATTCAACTGTAATTGTTCTTCCGCTTTTTCACGTTCACGGATTAATCGCCGGATTACTGAGTTCACTCGGTGCCGGAGCTTCCGTCGCGTTACCATCGGCGGGAAGATTCTCGGCTTCAACGTTTTGGAAAGACATGATTCAATACAACGCCACGTGGTACACAGCTGTTCCTACCATACACCAGATCATACTAGATCGACACTTAAATAACCCCGAACCGGTGTACCCGAAGCTCCGGTTTATAAGAAGCTGTAGTGCTTCATTGGCACCGGTTATTCTAGGTCGTTTAGAGGAAGCATTTGGGGCTCCAGTTTTGGAAGCTTATGCAATGACGGAGGCTTCTCATTTAATGTCTTCGAATCCTTTGCCAGAAGATGGGCCCCACAAAGCTGGGTCGGTTGGGAAACCCGTGGGTCAAGAAATGGTTATATTGGATGAGTCGGGTCGGGTTATGGAAGTGGAAGTTAAGGGTGAGGTTTGTATTAAGGGTGAGAATGTTACCAAAGGTTATAAGAATAATGATGAAGCCAATACGACGGGGTTTTTGTTTGGTTGGTTTCATACCGGTGATATTGGGTATTTTGATTCTGATGGATATTTGTATCTTGTGGGTCGAATTAAAGAGCTCATAAATAGAGGAGGAGAGAAAATATCACCAATAGAAGTAGATGCTGTCCTTTTAACACATCCAGAGGTAGCTCAGGCAGTTGCTTTTGGAGTACCAGATCAGAAATATGGGGAAGAGATACATTGTGCAATCATACCAAGAGAAGGATCAAATATTGATGAAGAAGAGGTCCTAATATATTGCAAGAAGAATCTCACATCTTTTAAAGTCCCAAAAAAGGTTTTCATTACTGATTCTTTGCCTAAGACAGCTACTGGCAAGATTTTGCGTCGGCTTGTCGCAGAACACTTGGTTGGAGGGAAACTTGGGATTTAA 1584 0.4527 METSTTLTGLLQSVAKKFPSRRAISVAGKFDLTHSRLHELVDSAAAHLISAGIKPNDVVALTFPNTIEYVVLFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPSEGNEPAQAAASKLNIPLGSASLIQIEGEQQQTKLKFSINQPESDLISNPVNSVTELINEPPDVALFLHTSGTTSRPKGVPLSQHNLVSSVKNIESVYRLSESDSTVIVLPLFHVHGLIAGLLSSLGAGASVALPSAGRFSASTFWKDMIQYNATWYTAVPTIHQIILDRHLNNPEPVYPKLRFIRSCSASLAPVILGRLEEAFGAPVLEAYAMTEASHLMSSNPLPEDGPHKAGSVGKPVGQEMVILDESGRVMEVEVKGEVCIKGENVTKGYKNNDEANTTGFLFGWFHTGDIGYFDSDGYLYLVGRIKELINRGGEKISPIEVDAVLLTHPEVAQAVAFGVPDQKYGEEIHCAIIPREGSNIDEEEVLIYCKKNLTSFKVPKKVFITDSLPKTATGKILRRLVAEHLVGGKLGI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02844 527 PANTHER OXALATE--COA LIGASE-LIKE 1 520 - -
Car06g02844 527 SUPERFAMILY Acetyl-CoA synthetase-like 5 521 - -
Car06g02844 527 ProSitePatterns Putative AMP-binding domain signature. 177 188 IPR020845 -
Car06g02844 527 Gene3D - 5 419 IPR042099 -
Car06g02844 527 Gene3D - 420 521 IPR045851 -
Car06g02844 527 Pfam AMP-binding enzyme 12 426 IPR000873 -
Car06g02844 527 Pfam AMP-binding enzyme C-terminal domain 435 510 IPR025110 -
Car06g02844 527 CDD FACL_fum10p_like 19 518 IPR045310 GO:0016874
Car06g02844 527 PANTHER ACYL-COA SYNTHETASE 1 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02844 Car-Chr6 42822734 42827308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02844 2 520 Monolignol Biosynthesis Gene Families AT4G05160 29.112 4.88e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02844 K22133 - gmx:100779306 833.172