Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02837 ATGGGGTGTTTCAATGCCTTGAAATACATGAAGAAAAAGGGTGAAAAATGCAACACACAACATATCAGCCATAGTGAGCATGCATCTACTGCACTGCCTCAACTTGAAACTCAAAATTACTCAATGCACACTAGCATGAAATCCATTCAACATAACATGGGTGTTATCCACTCCACTAGAACACGGGCATTATCCACTCGAACGGCTCTTGATGATGCAGCAGCACAAGAAACTCTAGCCTCAATTGAGCTTGAGGAAAAAGAAAGGTCGAAAAGCCAAGCGAGATTATCAAAGGAGCTGCATTCACCTAGTCCACAACCTTTACCCCTCCCATTTCCTCAAGGAGATGCTTTTGATTTATTTCACTATGAAGAACAAGTATGGTCTAAGACCCGAGATAGATTGATGAAGAAACAACGTTCATCTAGTTCGCAACCTTTACCGCTTCCATCTCCTATAGGAAGAAGTTCATTAAAGGCTAGTGGCAGCATTAAATCGGGAAAAACTATTGATTCCATTCGTTACTTTCCTTATGAGGAAATCGCTGCTGCTTGCCTCAATTTCTCTTCAGATCGATGCATCTCAGAATGTCTTTCTTCTACTATATATAAAGCTTCCTTTGGTATTGATTCTTCAAGTAAGAAGCTTAAAGCCACGGTCACGTGCCTTCAACCGTCGACTCGGGGGTTGAGGGAATTCATGAATGAAGTTAATACTCTTGCATCTTTGCAACATCCAAACCTATGTAAATTGCTCGGATTTCATGCCCGCGATGGTTATCAACAAAGAATTTTGGTTTATGAGAGGCTAAGCAATGGGAGCTTGGATCGCCTTTTGTTCCGGAGATCTGATGGACCTTCAATTGATTGGAACTCAAGAATGAAAATTGCCATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGTCCTTTTCAGGCAATGTATAATGATTTTTCAGCAGTACATATACAGATTGACAAAGATTTCAATGCAAAGCTTACAGGATATGGTTTTGTTGGACATATTGCCGACGAAGACATTTCAAGCAGTTCATCGGCGGCAGCAAACCTTTCAGTGGAGACATTGGAAAAAGGAATGCTAACTCCAAAGAGCATTGTATGGAGTTTTGGAATTGTTCTTCTAGAGCTGCTTACCGGTAGAAAGAATTTGGACAACCATCTCCCTGAGAAAGAGAGGAGCTTAGTCAAGTGGTGTCGGCCTTTCGTAGCGGACAATTTCCAATTGTCAGCGATCATGGATTCTCAACTCAAAGGTCGATTTTCGCCCAAAGCAGCGAGAACAGTAGCTGGCATTGTACAAAGATGCCTCCAAAGGGATCCATCAGAAAGACCAACCATGAGAGCCATTGTTGAAAATCTCAAAATCATACTAGATATGCAGTATCCTAGTTGGTTTCCATTGCAAGAGCCATCAGCAGCCATGTATGGAAGACATGTGCCAAGAACACCAAGTGTTGATGGCATCATATGTCATGCACCAAGATTGAGTTTCTCTGCTCCATCACTACCATCAGTAGGCAGAGCATCTATTTCACATCCTGCAAGACGGTCTGTTGGGACCACAACGCTTCCTTCTCCCCTTGCTTGTTCATCCACTGTTTCTACAGAAGAGCTCACTAGGCAGGAAAGTATAAAGTCGTCATACTCATTATCCGAGAAAGCCTAG 1692 0.4238 MGCFNALKYMKKKGEKCNTQHISHSEHASTALPQLETQNYSMHTSMKSIQHNMGVIHSTRTRALSTRTALDDAAAQETLASIELEEKERSKSQARLSKELHSPSPQPLPLPFPQGDAFDLFHYEEQVWSKTRDRLMKKQRSSSSQPLPLPSPIGRSSLKASGSIKSGKTIDSIRYFPYEEIAAACLNFSSDRCISECLSSTIYKASFGIDSSSKKLKATVTCLQPSTRGLREFMNEVNTLASLQHPNLCKLLGFHARDGYQQRILVYERLSNGSLDRLLFRRSDGPSIDWNSRMKIAICAAQGLTFLHEEGPFQAMYNDFSAVHIQIDKDFNAKLTGYGFVGHIADEDISSSSSAAANLSVETLEKGMLTPKSIVWSFGIVLLELLTGRKNLDNHLPEKERSLVKWCRPFVADNFQLSAIMDSQLKGRFSPKAARTVAGIVQRCLQRDPSERPTMRAIVENLKIILDMQYPSWFPLQEPSAAMYGRHVPRTPSVDGIICHAPRLSFSAPSLPSVGRASISHPARRSVGTTTLPSPLACSSTVSTEELTRQESIKSSYSLSEKA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02837 563 Gene3D Transferase(Phosphotransferase) domain 1 270 472 - -
Car06g02837 563 MobiDBLite consensus disorder prediction 132 163 - -
Car06g02837 563 Pfam Protein tyrosine and serine/threonine kinase 196 462 IPR001245 GO:0004672|GO:0006468
Car06g02837 563 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 42 561 - -
Car06g02837 563 MobiDBLite consensus disorder prediction 82 111 - -
Car06g02837 563 MobiDBLite consensus disorder prediction 515 563 - -
Car06g02837 563 MobiDBLite consensus disorder prediction 82 96 - -
Car06g02837 563 PANTHER OS01G0588500 PROTEIN-RELATED 42 561 - -
Car06g02837 563 Gene3D Phosphorylase Kinase; domain 1 155 268 - -
Car06g02837 563 MobiDBLite consensus disorder prediction 523 563 - -
Car06g02837 563 ProSiteProfiles Protein kinase domain profile. 188 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02837 563 SUPERFAMILY Protein kinase-like (PK-like) 173 489 IPR011009 -
Car06g02837 563 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02837 Car-Chr6 42407223 42410080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02837 172 465 Receptor kinase-like Gene Family AT4G02010 33.225 1.31e-47 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Car06g02837 PK_Tyr_Ser-Thr 3.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02837 - - gmx:100809117 603.594