Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02836 ATGGAGTCAAAGTGCTGCATGAATATGACGTGTGCTACCTCTACGTCGATTCGGTGGCGCAAAGGTTGGCTTCTTCGATCCGGTGAATTTGCCGATCTATGTGATAAGTGCGGTGCTGCTTATGAGCAATCAGCATTTTGTGATATGTTCCATGCGAATGATTCTGGTTGGAGAGAGTGCACTTCTTGTGGCAAGCATCTCCATTGTGGATGCGTTGCTTCAAGGTCGCAGCTTGAAATACTTGATACTGGTGGTGTCAGCTGTATAACCTGTGCAAGTAATTCAGGACTTCACCCTATTGCTAGTACTGAAAAGGTTAATGAATCTGGGACATCAAAGATAATAAATGTCAGTGCGCAGCAGTCCATATCTCTGGCTAACCAATTAAATGTGAGGGATATGCAAGTAGGGAATTATGGAGAGAATGACGGGCTAAGATGCTGGCTCAAACCTCACAAAGTTGATACAGATGGGCCTTCTACAGTTATCAAACCAGAAGTTTTACCCTCTGTTGGAGAATTTGGAAGCACTTTGATATCGCAATTTCATCGAGAGTCAAATGGATCATCTAGGACTGCGAACGCAGAGAACTGTAAGGCAGACGATGTGCAAGATATATATGAATCACTGGCACCTACAAATTTGAGTATGACTGTTGCTGCTCCTTTGGTAAATTTGAATCCCTTTCATAACGTCCTTGTTGATGAAAGGGAACAAAGCAAAGCATCACCTTCACTTCTATTGGGGTCTAGATCTCGCCATCTTTTACCTAAACCCCCTAGGCCAACTCTTTCTTCAGGTTTAGAAGCAAATGCAGGCACAGTGTCCCAGATTCGTATAGCAAGGCCTCCTACTGAAGGACGGGGAAGTCCACGATATTGGCCTAGAATTACAGATCAAGAGTTGCAGCAAATATCAGGAGATTCAAATTCCACAATCGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATCGGCCGATTGGTTCTACCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCGGAGGGCCTTCCTTTGCGAATACAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGTGTAACCCCTTGTATTCAATCAATGCAACTGCAAGCTGGCGATACTGTGACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGGTTCAGGAAGGCAACAGATTCTGCTTCAGTACAGGAAACTTTTCCGTCTAAAATGCACAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGTGAATGTACCTATATTAAGTGGTTACTCTGGCCTTCTTCAGTCACAAAAGGGATGTTCAGAAAACCACCTAAATGCGCTGTCTAATAGATGGAACTCAGCTGGTGGTGACATGGATTGGCATAATGTAGAAATGCCTCAAAGCAGGAAAAGAGATGGATTGTGTTTGCCACCCATTCTGGTTCCCGAGAAGAAAAAAACTCGAAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGATAGCCAGGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTACTTTGTCCACCTCTAGCAGTTAAGCCAAGTGTTGTCATGATTGAGGATCACCTATTTGAAGAATATGAAGAACCTCCTGTCTTTGGAAAGAAGAGTATATTTGTGGTACGATCAACTGGGATAAATGAGCAATGGACACAGTGTGATAGTTGCTTAAAATGGCGGAAGTTACCAGTTGATGTACTTATTCCCCCTAATTGGACATGTATGGAGAATTTATGGGATCAAAGCAGGTGTTCATGTGCTGCTCCCAATGAATTGAACCCAAGGGAACTGGATAATCTTTTGAGAATGAACAAGGAGTTCAAGAAACAAAGACTAGCAGCAGCTAGCCAGAGGTCAGCACTGGAACGTGAATCTTCTGGTCTTGATGCTTTGTCAAATGCTGCAATAGTTGGAGATGATGCAAGTGACTCTGGCAGGACCCCAGTTGTGACCACCACAAGACATCCTCGTCATAGACCCGGGTGCTCCTGCATCGTTTGTATCCAGCCACCAAGTGGAAAGGGCAAACACAAACCTACATGCACCTGTAACGTGTGCATGACAGTTAAACGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAGAGGGAAGCTGAGATTGCTCAGAAAAATATGCTATCATGGAGGACCAAAGATGAATCAGAAGGAGACAGCACCTCTCGACATTTAACTCCAGTTGGTGGTTCGGAGAATCAAGCAACAGTGCTAAATGAGTTGGATTCAAGGAGTCAAGACCATGTGTCTGAAGCAGCTAAGGGACAATTAGACCTGAATTGCCAACCAGACCGAGAAGTCATGCAATCTGGGCAAAACACTCTGAGCATGATGACTCTTCTTGAAGAAGCAATTCTCCCCCTGGAGACATACTTGAAGCAAAATGGTCTTTCTAGCTTGATATCAGAGCAGCAAACAAATTCAGATACAAATGTGCAGGCACAGACAACCAATGAGAGTGAGGGTAGACAAAATGAAGACTGCCATACTGCTTCTGCAGTTCATGAACAGGAAGGCAGTCCTAAAGAGAACAGTGGGCAAGAAAGAGACCAAAACAATTCTCTTTCATGA 2712 0.4344 MESKCCMNMTCATSTSIRWRKGWLLRSGEFADLCDKCGAAYEQSAFCDMFHANDSGWRECTSCGKHLHCGCVASRSQLEILDTGGVSCITCASNSGLHPIASTEKVNESGTSKIINVSAQQSISLANQLNVRDMQVGNYGENDGLRCWLKPHKVDTDGPSTVIKPEVLPSVGEFGSTLISQFHRESNGSSRTANAENCKADDVQDIYESLAPTNLSMTVAAPLVNLNPFHNVLVDEREQSKASPSLLLGSRSRHLLPKPPRPTLSSGLEANAGTVSQIRIARPPTEGRGSPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATDSASVQETFPSKMHNGSHSSETSYSGVYVNVPILSGYSGLLQSQKGCSENHLNALSNRWNSAGGDMDWHNVEMPQSRKRDGLCLPPILVPEKKKTRNIGSKSKRLLIDSQDALELKLTWEEAQDLLCPPLAVKPSVVMIEDHLFEEYEEPPVFGKKSIFVVRSTGINEQWTQCDSCLKWRKLPVDVLIPPNWTCMENLWDQSRCSCAAPNELNPRELDNLLRMNKEFKKQRLAAASQRSALERESSGLDALSNAAIVGDDASDSGRTPVVTTTRHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQKNMLSWRTKDESEGDSTSRHLTPVGGSENQATVLNELDSRSQDHVSEAAKGQLDLNCQPDREVMQSGQNTLSMMTLLEEAILPLETYLKQNGLSSLISEQQTNSDTNVQAQTTNESEGRQNEDCHTASAVHEQEGSPKENSGQERDQNNSLS 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02836 903 MobiDBLite consensus disorder prediction 849 868 - -
Car06g02836 903 MobiDBLite consensus disorder prediction 735 780 - -
Car06g02836 903 SUPERFAMILY DNA-binding pseudobarrel domain 314 416 IPR015300 -
Car06g02836 903 MobiDBLite consensus disorder prediction 849 903 - -
Car06g02836 903 CDD B3_DNA 315 416 IPR003340 GO:0003677
Car06g02836 903 ProSiteProfiles Zinc finger CW-type profile. 582 632 IPR011124 GO:0008270
Car06g02836 903 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 855 - -
Car06g02836 903 Coils Coil 642 662 - -
Car06g02836 903 Pfam CW-type Zinc Finger 587 629 IPR011124 GO:0008270
Car06g02836 903 SMART B3_2 317 417 IPR003340 GO:0003677
Car06g02836 903 Gene3D - 585 641 - -
Car06g02836 903 ProSiteProfiles B3 DNA-binding domain profile. 317 418 IPR003340 GO:0003677
Car06g02836 903 Pfam B3 DNA binding domain 317 416 IPR003340 GO:0003677
Car06g02836 903 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 855 - -
Car06g02836 903 Gene3D - 295 421 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02836 Car-Chr6 42395906 42406255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02836 1 854 B3 DNA Binding Superfamily AT4G32010 48.899 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car06g02836 B3 1.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02836 - - gmx:100778833 1536.93