Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02825 ATGGATGTAACTCTTGTTGGCATTTTGCATCAACCGATGGCCTCTCTAAATCCAATGACCTTGAAATTCTCACTATTATTAATTATAATTCTTGCATTCAAGTCATACGAAAAAGAAATATTTGCATTTGAGACTAGAGAGAATATTGTTTTGTGTCCTAAAGTAAAAGTTATAATTATTAATGGATTAGATGCACCAGTAACTCCCAAACGTCTCACTGTTCATTGTAAATCGAAAGACGATGATCTTGGATTTCACACACTCGAGTATGGACAAAGTTATGATTTTTCATTCAGGCCACTTGTATTTCCAAAGTGGGAAGCGACATTATTCTTTTGTAGCTTTACATGGCCTACAAATACTCAGCTTCATTATCTTGACGTTTACAATCAACGAAAAGATAAGTGCATCACTTGCCCATGGAAAATATCGTCAAAAGATGGTTGTAAGTATAATTCTGATTTTAAAGACTTCGATATTTGTACTCCTTTTAAAAGTATGAAATTAATTGATGCAAACAGTACTTCTAAGATTTAA 537 0.3277 MDVTLVGILHQPMASLNPMTLKFSLLLIIILAFKSYEKEIFAFETRENIVLCPKVKVIIINGLDAPVTPKRLTVHCKSKDDDLGFHTLEYGQSYDFSFRPLVFPKWEATLFFCSFTWPTNTQLHYLDVYNQRKDKCITCPWKISSKDGCKYNSDFKDFDICTPFKSMKLIDANSTSKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02825 178 PANTHER - 27 157 IPR010264 -
Car06g02825 178 PANTHER S-PROTEIN HOMOLOG 18-RELATED 27 157 - -
Car06g02825 178 Pfam Plant self-incompatibility protein S1 57 162 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02825 Car-Chr6 41834224 41834787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02825 53 169 Carbohydrate Esterase AT3G16970 39.024 1.30e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02825 - - cam:101497766 374.015