LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g02823	ATGGCGCATAACGACTCAAACTCCGATCCCAATCCCCAAACCCGATTCTACAACCCATACACAGACCTCCTCGATATTCCTATTCAAAATCTCTACAAACTCTTCACTTTACTGGAGTTTCTCTTCGACGAAGAAGCTCGCCGTAAACGCAGTTCATGGGGAGAAAATCTCACATTCTACACCTGTTGCGGTTACCTTGGTGGTTCAATCGCCGGTGCCGGAGTCGGACTCGTCGATGGCGTTAAAGCCTTCGAGTCTAGCGAAGCTTCAGATGACTACCTCATGTACACTGCTGATACGTTTTTATCTAACGGTAGTGAACTCTTGCTTGAGATCTTAGGTCCCGGCATTGTAGGTGGATTGTTTCTTCCTGTACTCGGTGCTCTCCCTGATGCAATGCTCATTCTCGGTACCAATTCCACATTAATACAATTTTTATTCTTTCACATAAAGCTTGATGGTCCTGAAGGGGAAAGAGAGTTATCAGATATAGATGTCCAATCAGCAATATGGGAGGTTTGCGGTGAGTATGGCGCTTTACAAGGGCTAGTTGATCTTCTTCATGTCAAGCTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGACTTTGAATTGCTCAAGAAGGCTCTTACCATTGATAACCAGGAAGATAACAAAcaatatgcaattagaaatcttcactcttgcaatttacaaCACAAGTATCAAATTTGA	720	0.4167	MAHNDSNSDPNPQTRFYNPYTDLLDIPIQNLYKLFTLLEFLFDEEARRKRSSWGENLTFYTCCGYLGGSIAGAGVGLVDGVKAFESSEASDDYLMYTADTFLSNGSELLLEILGPGIVGGLFLPVLGALPDAMLILGTNSTLIQFLFFHIKLDGPEGERELSDIDVQSAIWEVCGEYGALQGLVDLLHVKLMDLEEHSGTEESDFELLKKALTIDNQEDNKQYAIRNLHSCNLQHKYQI	239

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g02823	239	PANTHER	TIM23	3	88	IPR045238	GO:0022857
	Car06g02823	239	PANTHER	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE	3	88	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car06g02823	Car-Chr6	41731206	41734172	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car06g02823	2	90	Chloroplast and Mitochondria Gene Families	AT1G72750	56.522	3.99e-27	101

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g02823	K17794		-	gmx:100813158	117.087