Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02820 ATGATTGTCTTTGTGTCGTTCGACAAAGGAACATTTGCATTTGAGTCTAGAGAGGATTTTAGTATTAATCCAAAGGTACACGTTGTAATTACGAACGGATTAGATGCACCAACAACTTCCAAAAATATCACTGTTCATTGCAAATCTAAAGATGACGATCTTGGATTTCACACACTCATGTTTGGAGAATCTTGGGATTTTACATTTAGGCCACTAGTATTTCCACGTTGGCAAGAGACGTTATTCTTCTGCAGCTTTACATGGCCTAAAGATCCCCTCCTTCATTATCTTGATGTTTACAATCAAAAAAAAGATGAATGCATCGAGTGCTTATGGAAAATTACGTCAAAAGGTGGTTGTAAGTATAACTCAAATTTGAAAAAGTATGATGTGTGCGTTCCTTGGAAAAGTGTTCAAGTAGTTGGGGCAAACAATTCTTCCAAAATTTAA 450 0.36 MIVFVSFDKGTFAFESREDFSINPKVHVVITNGLDAPTTSKNITVHCKSKDDDLGFHTLMFGESWDFTFRPLVFPRWQETLFFCSFTWPKDPLLHYLDVYNQKKDECIECLWKITSKGGCKYNSNLKKYDVCVPWKSVQVVGANNSSKI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02820 149 Pfam Plant self-incompatibility protein S1 27 135 IPR010264 -
Car06g02820 149 PANTHER S-PROTEIN HOMOLOG 18-RELATED 14 135 - -
Car06g02820 149 PANTHER - 14 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02820 Car-Chr6 41460521 41460970 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02820 23 140 Carbohydrate Esterase AT3G16970 42.742 8.51e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02820 - - cam:101494349 323.168