Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g02820 | ATGATTGTCTTTGTGTCGTTCGACAAAGGAACATTTGCATTTGAGTCTAGAGAGGATTTTAGTATTAATCCAAAGGTACACGTTGTAATTACGAACGGATTAGATGCACCAACAACTTCCAAAAATATCACTGTTCATTGCAAATCTAAAGATGACGATCTTGGATTTCACACACTCATGTTTGGAGAATCTTGGGATTTTACATTTAGGCCACTAGTATTTCCACGTTGGCAAGAGACGTTATTCTTCTGCAGCTTTACATGGCCTAAAGATCCCCTCCTTCATTATCTTGATGTTTACAATCAAAAAAAAGATGAATGCATCGAGTGCTTATGGAAAATTACGTCAAAAGGTGGTTGTAAGTATAACTCAAATTTGAAAAAGTATGATGTGTGCGTTCCTTGGAAAAGTGTTCAAGTAGTTGGGGCAAACAATTCTTCCAAAATTTAA | 450 | 0.36 | MIVFVSFDKGTFAFESREDFSINPKVHVVITNGLDAPTTSKNITVHCKSKDDDLGFHTLMFGESWDFTFRPLVFPRWQETLFFCSFTWPKDPLLHYLDVYNQKKDECIECLWKITSKGGCKYNSNLKKYDVCVPWKSVQVVGANNSSKI | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g02820 | 149 | Pfam | Plant self-incompatibility protein S1 | 27 | 135 | IPR010264 | - | |
| Car06g02820 | 149 | PANTHER | S-PROTEIN HOMOLOG 18-RELATED | 14 | 135 | - | - | |
| Car06g02820 | 149 | PANTHER | - | 14 | 135 | IPR010264 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g02820 | Car-Chr6 | 41460521 | 41460970 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car06g02820 | 23 | 140 | Carbohydrate Esterase | AT3G16970 | 42.742 | 8.51e-27 | 96.3 |