Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02795 ATGGCCACTTATGCAACCGCTTTGTTGCTCTTACTTTCTTTGGTAACTACAACCACCACCTTTTGCCTCCAAGAAATGGAGGTACTCCAAATGGCCCAAACACAAGTTTCAGAAGCCATGAGTTGGGTTGATAACTCCATGAGATTGCATGGCTTAGAAAGCATGAGCATCTCATCAAATATATCAAGTGTTTTGGCTCTAAGAGATTGTGCTAAACTCTATGAAGAGAGTGAGTTTAGGCTCTCTCACATGGTGTCTAAAAATAGTAGTTACACTAATGATGATGCTCTTACATGGGTAAGTGCGGTGATGACAAATCATAGGACTTGTTTGGATGGATTGAAGGAAAAGGGGTATTTCCAGGGTCACCAATTTTTTTTGGGTAGAAACATGTCAAGGTTGCTTGGCCAAGCACTTGTTTTGTATTCGAAAAACAAAGTCAAAGGTAAAGCACCACCTCAGAGAATTACAACTTCAGAAGAAAATGATGGTCTATTAGAATCATGGGATCTAGCAAACAATAATGCACACTTCACAGTGGCACATGATGGATCAGGAACCTACAGAACAATCAAAGAAGCAGTGGATGCACTTTCTTCAATGGGTCACAACCGTCCTGGAAGAGCAATTATATATGTAAAAGCAGGAGTGTACAATGAGAAAGTGGAGATTGGAAACAAATTGCACAATGTGATGTTTGTTGGAGATGGCATTGACAAAACTATTGTCACTGGAAACAGAAATGTTCCTCATGGTTATACCACTTTAAACTCTGCCACATTTGATGTATCAGGGGACGGATTTTGGGCAAGAGATATGACATTTGAGAACACAGCAGGCCCCGAAAATCACCAAGCAGTAGCACTCAAAGTAAGTTCAGACTTGTCAGTATTCTACAGATGCAGCTTCAAAGCCTACCAAGACACACTTTATGTCCATTCAAATCGCCAATTCTATCGCGACTGTCACATATACGGAACAATCGATTTCATATTCGGCGACGCAACAGTCGTTTTACAAAACTGTGACATCTTTGTTAGGAAACCAATGAGCCAACAAACTAATTTCATAACAGCACAAGGAAGAGATGATCCTAACAAACCAACTGGAATTTCAATCCAAAGTTGTAGGGTTAGGCCTTCATCTGAATTTTCGATGTTTAAGGATTCTATTAAGACTTTTTTAGGAAGGCCTTGGAGGAAATATTCAAGGACAGTGTATCTTAAATCTGATTTGGATGGATTGATTCATCCTAAAGGGTGGGGTGAATGGGAAGGAAATTTTGCATTATCAACTTTGTATTATGGTGAGTATATGAACACAGGAAATGGTGCATCTACACAAAATAGGGTTAATTGGCCTGGTTTTCATGTGCTAAGTAGTGCTAATGAAGCTTCACATTTTACTGTGAGTCAATTTTTGCAAGGGGAACATTGGATTCAAGCTTCAGGGGTGCCATTTTGGTCTGGAATTTAA 1476 0.3963 MATYATALLLLLSLVTTTTTFCLQEMEVLQMAQTQVSEAMSWVDNSMRLHGLESMSISSNISSVLALRDCAKLYEESEFRLSHMVSKNSSYTNDDALTWVSAVMTNHRTCLDGLKEKGYFQGHQFFLGRNMSRLLGQALVLYSKNKVKGKAPPQRITTSEENDGLLESWDLANNNAHFTVAHDGSGTYRTIKEAVDALSSMGHNRPGRAIIYVKAGVYNEKVEIGNKLHNVMFVGDGIDKTIVTGNRNVPHGYTTLNSATFDVSGDGFWARDMTFENTAGPENHQAVALKVSSDLSVFYRCSFKAYQDTLYVHSNRQFYRDCHIYGTIDFIFGDATVVLQNCDIFVRKPMSQQTNFITAQGRDDPNKPTGISIQSCRVRPSSEFSMFKDSIKTFLGRPWRKYSRTVYLKSDLDGLIHPKGWGEWEGNFALSTLYYGEYMNTGNGASTQNRVNWPGFHVLSSANEASHFTVSQFLQGEHWIQASGVPFWSGI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02795 491 SMART PMEI_2 4 141 IPR006501 GO:0004857
Car06g02795 491 PANTHER PECTINESTERASE 6 490 - -
Car06g02795 491 Gene3D - 171 491 IPR012334 -
Car06g02795 491 SUPERFAMILY Pectin lyase-like 176 490 IPR011050 -
Car06g02795 491 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 18 143 IPR035513 -
Car06g02795 491 ProSitePatterns Pectinesterase signature 2. 324 333 IPR033131 -
Car06g02795 491 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 6 490 - -
Car06g02795 491 Pfam Plant invertase/pectin methylesterase inhibitor 30 121 IPR006501 GO:0004857
Car06g02795 491 Pfam Pectinesterase 178 477 IPR000070 GO:0030599|GO:0042545
Car06g02795 491 CDD PMEI-like_4 28 145 - -
Car06g02795 491 Gene3D Invertase/pectin methylesterase inhibitor family protein 16 144 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02795 Car-Chr6 40229408 40235393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02795 8 491 Carbohydrate Esterase AT3G60730 53.668 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02795 K01051 - gmx:100792852 738.413