Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02793 ATGTCACAACAAAAAATTGCCCTAACATTACTAGTCATTTTCATCTCACTCTTTTTAGAGTCTTCCCTAGCTAAAGAAAACTCCCAAACAATAGCCTACATAGAGTCCTCTTGCCATGGTACCCTCTATCCTAATCTATGCATTCGTTGCCTTAACAAATTTTCCAATTCAACCATTAATGGGCCTCAACATTTAGCCCATATTGCCTTATCGGTGAGCCTCTCTAAAGCCCTACAAACAAGAGGATACCTTTTAAAAGTGACAAAGGAACTTCAAACAATTAATCATAACAACAAAAGGATGTACCTAACCGTGCAAGATTGTGTGAATCAAATCAATGATAGTTTTGATCAACTTAGTCAAGCCATCAAAGAATTAAAAAGGTTGAACCAATCTAGCACCATCATTAGTGATAAAGTGTTGTGGCATATAAGTAATGTTGAGACATGGGTGAGCACTGCCTTAACCGATGCAAGTAGTTGTGTTCAATCATTACCAGGTGATAGGATGAGTAAAAGGGTAGCGATGATTAAGGTTAAGGCGAAGAATGTTGCTGAAGTTACTAGTAATGCACTTGCTTTGTTCCATAGTTATGCTTCTAGGTACAAGCAAGTTGCAGCTAGAACCACTAAGAAGCCTTGA 642 0.3801 MSQQKIALTLLVIFISLFLESSLAKENSQTIAYIESSCHGTLYPNLCIRCLNKFSNSTINGPQHLAHIALSVSLSKALQTRGYLLKVTKELQTINHNNKRMYLTVQDCVNQINDSFDQLSQAIKELKRLNQSSTIISDKVLWHISNVETWVSTALTDASSCVQSLPGDRMSKRVAMIKVKAKNVAEVTSNALALFHSYASRYKQVAARTTKKP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02793 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 202 - -
Car06g02793 213 CDD PMEI-like_3 36 200 - -
Car06g02793 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 198 IPR006501 GO:0004857
Car06g02793 213 Coils Coil 109 132 - -
Car06g02793 213 SMART PMEI_2 29 194 IPR006501 GO:0004857
Car06g02793 213 Pfam Plant invertase/pectin methylesterase inhibitor 33 194 IPR006501 GO:0004857
Car06g02793 213 PANTHER BNAANNG18590D PROTEIN 6 202 - -
Car06g02793 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 197 IPR035513 -
Car06g02793 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02793 Car-Chr6 40156483 40157321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02793 20 195 Carbohydrate Esterase AT5G53370 28.415 3.70e-12 63.2