Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02786 ATGGCACAAAAACTCATTCTCACATCACTAGTCATTTTCCTCTCGCTCCTCTTAGAGACCTCTTTGGCCAAAAACAACTCTCAAACAATGACGTACATAGAGTCCTCTTGCCATGGTACCCTCTATCCTAATCTATGCATTCGTTGCCTTAACAAATTTTCCAATTCAACCATTAATGGGCCTCAACATTTAGCCCATATTGCCTTATCGGTGAGCCTCTCTAAAGCCCTACAAACAAGAGGATACCTTTTAAAAGTGACAAAGGAACTTCAAACAATTAATCATAACAACAAAAGGATGTACCTAACCGTGCAAGATTGTGTGAATCAAATCAACGATAGTGTTGATCAACTTAGTCAAGCCATCAAAGAATTAAAAAGGTTGAACCAATCTAGCACCATCATTAGTGATAAAGTGTTGTGGCATATAAGTAATGTTGAGACATGGGTGAGCACTGCCTTAACCGATGCAAGTAGTTGTGTTCAATCATTACCAGGTCATAGGATGAGTAAAAGGGTAGCGATGATTAAGGTTAAGGCGAAGAATGTTGCTGAAGTTACTAGTAATGCACTTGCTTTGTTCCATAGTTATGCTTCTAGGTACCGACAACAAGCAGCTAGAACTACCAAGAAGCCTTGA 639 0.3944 MAQKLILTSLVIFLSLLLETSLAKNNSQTMTYIESSCHGTLYPNLCIRCLNKFSNSTINGPQHLAHIALSVSLSKALQTRGYLLKVTKELQTINHNNKRMYLTVQDCVNQINDSVDQLSQAIKELKRLNQSSTIISDKVLWHISNVETWVSTALTDASSCVQSLPGHRMSKRVAMIKVKAKNVAEVTSNALALFHSYASRYRQQAARTTKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02786 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Car06g02786 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 197 IPR035513 -
Car06g02786 212 PANTHER BNAANNG18590D PROTEIN 4 201 - -
Car06g02786 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 197 IPR006501 GO:0004857
Car06g02786 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 196 IPR035513 -
Car06g02786 212 CDD PMEI-like_3 35 199 - -
Car06g02786 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 201 - -
Car06g02786 212 Coils Coil 108 131 - -
Car06g02786 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02786 Car-Chr6 40009287 40010077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02786 19 194 Carbohydrate Esterase AT5G53370 28.415 1.39e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02786 - - mtr:MTR_4g025590 321.627