Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02766 ATGCGATTCAAGCTAGGCAAGCGAGTCATTCGGGTCACCCGATGCATCTTCCGGAGATTTCGGACCCGACCCAAATACCAACGTCTTGGTAAATCCTCAAAGAAGAGTCACATGAAGAAGCTTTTAACGTGGGGTCGCAAGTTAACTAATAGAGCAAGGTCTCTATGTTCTACATCGTTAAAAGGGTCGGGTTATTTACCGGTTGGATCCGACTTGGTTTTGGGAAGTGGTTCTCCAGTTCCGAAGGGGCATTTAGCTGTGTACGTGGGTCAGAAAGACTGTGAGTTTCATCGGGTTTTGGTTCCGGTGGTTTATTTCAACCACCCATTGTTCAACGAGTTGTTGAAAGAAGCTGAGAAGGAATATGGGTTTTGTCACCAAGGCGGGATCACGATTCCTTGTCGGGTTACTGATTTTGAACGGGTCAGGACCCGAATAGCATCTGGGTCGGGTTTACGGAGATTGAAGTGGCGGAAACATTTTGACAGTTGA 492 0.4715 MRFKLGKRVIRVTRCIFRRFRTRPKYQRLGKSSKKSHMKKLLTWGRKLTNRARSLCSTSLKGSGYLPVGSDLVLGSGSPVPKGHLAVYVGQKDCEFHRVLVPVVYFNHPLFNELLKEAEKEYGFCHQGGITIPCRVTDFERVRTRIASGSGLRRLKWRKHFDS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02766 163 Pfam Auxin responsive protein 74 143 IPR003676 GO:0009733
Car06g02766 163 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 160 IPR003676 GO:0009733
Car06g02766 163 PANTHER SMALL AUXIN-UP RNA-RELATED 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02766 Car-Chr6 39269622 39270689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02766 80 139 Calmodulin-binding Proteins AT3G43120 53.333 7.15e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02766 K14488 - mnt:21403743 196.823