Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02764 ATGTCCTCATCATCATCATCCACTTCCTTTTCACCGGACCAGCAACAACAACTATCTCCCTCCGACCAGCTCTGTTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACTAGTTTGTTCAAGACGGTCACAGTGAGATGTGGTCATTGCACCAACCTTCTCTCAGTTAACATGCGTGGTTTGCTCCTTCCTTCTGCTAATCAGCTTCACCTTGGTCACTCTTTCTTTAATCCTCAAAATCTTCTGGAGGAGATTCGAAATTCACCTTCAACAAACATGATGATGAATCAGCTTCCAAACCCAAATGATTTGGTCATGAACACCATGAGAGGAGGGCCAGAAGAAATCCCTAAACCTCCACCTGCTAACAGACCTCCGGAGAAGAGACAGAGAGTTCCATCTGCCTACAACCGCTTCATCAAGGATGAAATACAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTTAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGAATCAGAGGACGTGCTTATAAAAGATGGGTTTTTCACACAAGCTAATGTAGGTGTCTCTCCCTACTAG 660 0.4545 MSSSSSSTSFSPDQQQQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPSANQLHLGHSFFNPQNLLEEIRNSPSTNMMMNQLPNPNDLVMNTMRGGPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQESEDVLIKDGFFTQANVGVSPY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02764 219 SUPERFAMILY HMG-box 128 177 IPR036910 -
Car06g02764 219 PANTHER PROTEIN YABBY 6-RELATED 1 217 IPR006780 GO:0007275
Car06g02764 219 PANTHER PROTEIN YABBY 4 1 217 - -
Car06g02764 219 Pfam YABBY protein 20 183 IPR006780 GO:0007275
Car06g02764 219 Gene3D High mobility group box domain 123 180 IPR036910 -
Car06g02764 219 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02764 Car-Chr6 38988037 38992317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02764 31 217 C2C2-YABBY Transcription Factor Family AT4G00180 64.593 3.70e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Car06g02764 YABBY 1.6e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02764 K25796 - gmx:100781267 392.119