Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02727 ATGGTTCGCTCTAGTGGCATCACTCTCTTTACCCATTTTGCTCGTCGATCTCTCTTTCACGCCAACGATTCCGTGTATCAAGTAGTGTTCCAAAGGGGTTATAGGATATTGAATTCAGGATCACGCAATTCATCTAGAATTATTGGTAGTTATGCACCAAATGGTAGAGATGGTGTTAATTTGAAGAACTGGTTGCTATTGGGAGCGGCTAATTCATATTTGGGGGCTGCTAGGTCAATTCATGGCTCGGCATCATTGGCAAGGGACTATTATGACGTTCTTGGTGTGAGTAAGGATGCAAGCTCTTCTGAAATAAAGAAAGCTTACTATGGGCTTGCAAAGAAGCTCCATCCAGACACAAATAAAGATGACCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTACAATTGCATATGAGGTTTTGAAAGATGGGGAAAAACGTCAACAGTATGATCAGGTTGGACATGATGCCTTTGTAAACCAACAAAGCACTGGTTTTGGAGGCGAGGGTGGCTTTAATCCTTTCGAGCAGGCATTCCGTGGTGGTCATGATTTTTTCAAGAGCTTTTTCCATCAGAATGTTGGCGGAGAGGATGTCAAGACTATAATTGAACTATCTTTTACCGAAGCTATCCAAGGGTGCACCAAAACCTTGGAATTTCAAACAGATCTGCTGTGTAATACTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACTTGTAAGCAATGTAAAGGGTCAGGAGTGATATTTGTACAAACCGGAATATTCAGAATGGAGAGTACTTGTGCAACCTGCAGGGGAACTGGAAAAATTGTATCGAATTTCTGCAGGTCTTGCAAGGGTGCAAAAGTTGTCAAAGGAACAAAGACAGTCAAGTTGGATATTTTTCGTGGGATAGACAACAATGAGACCCTAAAGGTGTATGGAGGTGGTGCAGCAGATCCCGATGGACATCATTCTGGTGATTTATATGTTACTATCAAGGTTAGGGAAGATCCTGTTTTTCGCAGAGAAGGACTTGATGTTCACGTGGATGCTGTTGTAAGTTTCACTCAGGCAATTTTGGGGGCAATTATTGAAGTCCCAACTTTCACTGGACATGTATCACTTAGGGTTCCCCCAGGCACCAAACCTGGTGCGAAGGTGGTGTTGAAAAGGAAAGGTGTAGTGAGAGGGATCAGTTCAAAAGATACTCACAACTTAAAATATGGGGACCAATATGTTCATTTTAATGTCAGCATTCCAACAAACCTGACAGAGAGACAACATAAATTGATCGAAGAGTTTGCCAAGGAAGAGCAAGAGGAATTTGATAAACGGAGAGCTGCATCGTCTTCTAATTAG 1353 0.4242 MVRSSGITLFTHFARRSLFHANDSVYQVVFQRGYRILNSGSRNSSRIIGSYAPNGRDGVNLKNWLLLGAANSYLGAARSIHGSASLARDYYDVLGVSKDASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVTIAYEVLKDGEKRQQYDQVGHDAFVNQQSTGFGGEGGFNPFEQAFRGGHDFFKSFFHQNVGGEDVKTIIELSFTEAIQGCTKTLEFQTDLLCNTCGGSGVPPGTRPETCKQCKGSGVIFVQTGIFRMESTCATCRGTGKIVSNFCRSCKGAKVVKGTKTVKLDIFRGIDNNETLKVYGGGAADPDGHHSGDLYVTIKVREDPVFRREGLDVHVDAVVSFTQAILGAIIEVPTFTGHVSLRVPPGTKPGAKVVLKRKGVVRGISSKDTHNLKYGDQYVHFNVSIPTNLTERQHKLIEEFAKEEQEEFDKRRAASSSN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02727 450 CDD DnaJ_C 197 421 - -
Car06g02727 450 Hamap Chaperone protein DnaJ [dnaJ]. 86 445 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Car06g02727 450 Gene3D DnaJ domain 86 197 IPR036869 -
Car06g02727 450 Gene3D - 218 290 - -
Car06g02727 450 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 448 - -
Car06g02727 450 Pfam DnaJ domain 89 151 IPR001623 -
Car06g02727 450 ProSiteProfiles dnaJ domain profile. 89 154 IPR001623 -
Car06g02727 450 Pfam DnaJ central domain 226 286 IPR001305 GO:0031072|GO:0051082
Car06g02727 450 ProSiteProfiles Zinc finger CR-type profile. 213 291 IPR001305 GO:0031072|GO:0051082
Car06g02727 450 CDD DnaJ_zf 226 286 IPR001305 GO:0031072|GO:0051082
Car06g02727 450 SMART dnaj_3 88 146 IPR001623 -
Car06g02727 450 PRINTS DnaJ domain signature 91 109 IPR001623 -
Car06g02727 450 PRINTS DnaJ domain signature 109 124 IPR001623 -
Car06g02727 450 PRINTS DnaJ domain signature 126 146 IPR001623 -
Car06g02727 450 PRINTS DnaJ domain signature 146 165 IPR001623 -
Car06g02727 450 CDD DnaJ 89 143 IPR001623 -
Car06g02727 450 Pfam DnaJ C terminal domain 201 418 IPR002939 -
Car06g02727 450 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Car06g02727 450 Gene3D - 198 331 - -
Car06g02727 450 SUPERFAMILY HSP40/DnaJ peptide-binding domain 337 429 IPR008971 GO:0006457|GO:0051082
Car06g02727 450 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 213 289 IPR036410 -
Car06g02727 450 SUPERFAMILY HSP40/DnaJ peptide-binding domain 196 340 IPR008971 GO:0006457|GO:0051082
Car06g02727 450 Gene3D - 333 448 - -
Car06g02727 450 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 30 448 - -
Car06g02727 450 SUPERFAMILY Chaperone J-domain 88 190 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02727 Car-Chr6 36795356 36816358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02727 82 151 C2H2 Transcription Factor Family AT1G74250 42.667 2.46e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02727 K03686 - gmx:100799735 680.248