Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02711 ATGACTCAACCTGCTTGGGAAAAGATTGGAATCTACAGAGGTGGGATCATCCCCGTTTTATTCCAAATGGTTCCTTGCAAAAAGCATGGAGGGGCTAGGTTCAGTGTGAATGGGAGGGACTACTTTGAACTAGTGTTAATCAGCAATATAGGTGGTGCTGGATCAATCCAATCTGTGTCCATTAAAGGCTCCAAATCTGGTTGTTTATTTTGA 213 0.4272 MTQPAWEKIGIYRGGIIPVLFQMVPCKKHGGARFSVNGRDYFELVLISNIGGAGSIQSVSIKGSKSGCLF 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02711 70 Pfam Expansin C-terminal domain 33 65 IPR007117 -
Car06g02711 70 SUPERFAMILY Barwin-like endoglucanases 1 49 IPR036908 -
Car06g02711 70 PRINTS Expansin signature 30 42 IPR002963 GO:0009664
Car06g02711 70 PRINTS Expansin signature 42 63 IPR002963 GO:0009664
Car06g02711 70 PRINTS Expansin signature 6 19 IPR002963 GO:0009664
Car06g02711 70 PANTHER EXPANSIN-A15 1 67 IPR002963 GO:0009664
Car06g02711 70 PANTHER EXPANSIN 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02711 Car-Chr6 36413981 36414594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02711 1 69 Expansin Gene Family AT1G20190 76.812 1.16e-33 112