Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02687 ATGGGAAGGCAAAAGCATTCTGATACTTCACATCATTCTCCTGAGTGTAGTAAAAGCCTCTTACATATTATTAAGCACCATCCCTTATGTCATAATTTCATACAAAAAAGACATGCATACAAGAAGGAAAGTGTGATTGCACAAAGGGATGAAGCCTTCTCTTGTAACAAAAGGAAGAACCTCATCCTTGCACAGTTAAGAAGCTCAAATGTTGAAGAAAAGGTGACACTGCATTCTTCAGTTGGAAAAAACACAGAAAGAAACCAGATAGAAGTACTAATTGATGAAAACACAAGAACAAGAAGGTTTGTACAGTGTGATCCTACATTTAGTAGTGATTACCGCGAGTGTAACTTGGGTTACAAGCATCAACTAACAAAAAATGACTTACTTGCACGAAAAGTAAGAGATCAAATGAAATGCAGAGTAGAAGATATTGCAAAGCGAAACACTTTTGGTGTTTCCACTCTTTTATACAAGCACTTTTTTGGTACTTTGGAAACAACCAACATGAAAAAGGAAATATTATTAGCATTTCTTCATGATCCTGTCTCTCCTATGGTCTACCACTTCCATAAACAACGCGTGAAACGAGCAAAAGTGACACTAAATAGGTCTGAATCATTTCCTTTTCACGATTCTCTACCAAAATGGAAAGGAAGATTATATTGTGGCAATGAAACACAAAAGTTAGTCCAATATGAGTCCACAAAAACATTTTATGAACATGTCATGCCTCCATTAACAAAAGGAAGAGTAAATGGAAATTTCAATATAAACGAAGCGGAGATTGTAAGAGATGTTAGTTTTTCTTCAGGTTATGCAAAGGGTCAGAAACATAAAGAAATCAAACATGTTAATATGAATCTCAAACAAAAAATAGAGCACGTAACCGGAGAGAGCGAAAAAGAAAAGATTCGAGTCGCTATGGATTCGGTCATTCATAAACTTCCTCAAGGACAAGGAATATCAGATGAGTTGAAGAAGGAAATTTTGAAGAAATTGACAGATCCTATTATTAAAAGAGAAGTTCAATACAAGAACTGTATAAGAAGAATCAAGTCTCTTGAAGAACCACTAGAAAGTTACTTCAAACAGAAAGAGAATAGCTTCAGAATAGAAGATATACATCTTCAATATGAGAAACTAAAATTAGTGAAAGAAAAGTCACATTCTTCACCATTGAGAATGTTGATACCTTTAGAAAGAATTCTTTCATTACCTGATCTTCAATCTTTTTCCTATGCTTCACCATTGAGTTTCAATGACCAAGATATTATGGCAATAAAAGAATACAAGGCTTCAATAGCAGCATCAGATTCAAAATCTAAGGCGAGATCTTCCGATAGACCGAATAATGTGGATGAGCAACAAGTGACTAAGAAGGATTCCCTTAAAGTGATTAAAACCACAAAGAATGCTCACAAATTGGAGATTCAAACCAAGAAGTTCAACCATGAGATTCCTCATATTCATGTGGACACCAAAGACAAAGATGAGTTTAATTATGTGAAATATGTACTTGAGATATCTGGACTCACTAGTAATGAAAGTCTTTCTTCATGGCATGCTAAAGACACCCCCCTTGATCCATCACTATATGAAGAAATGGAAAATGATCCTGAATTTTGTTCTCACAAAGGTGGTCAATGTAATCACCATGTATTATTTGATTTAATTAATGAGACAATGTTGGAAATTTATGGGAGGTCACATTGTTGCCCTCCTATAGGGTGTCACATTCTTCATAAAGTTTGGACTCATATGAGCAAGTCTTTGGGTTTGAGATACAAAGTTGACCAAACAATAGATGATCATGTAGGTAGAGATTTCTCATCAAAAAGTGATGGGTGGGTCAACCATCATATTTATGATGAATGTGTTGGTTTGGAGATTGAAGACATGATTTTTCATGATCTATTGGAGGAAATAATGTTGGACTTAGCTTGTTTATGA 1956 0.3487 MGRQKHSDTSHHSPECSKSLLHIIKHHPLCHNFIQKRHAYKKESVIAQRDEAFSCNKRKNLILAQLRSSNVEEKVTLHSSVGKNTERNQIEVLIDENTRTRRFVQCDPTFSSDYRECNLGYKHQLTKNDLLARKVRDQMKCRVEDIAKRNTFGVSTLLYKHFFGTLETTNMKKEILLAFLHDPVSPMVYHFHKQRVKRAKVTLNRSESFPFHDSLPKWKGRLYCGNETQKLVQYESTKTFYEHVMPPLTKGRVNGNFNINEAEIVRDVSFSSGYAKGQKHKEIKHVNMNLKQKIEHVTGESEKEKIRVAMDSVIHKLPQGQGISDELKKEILKKLTDPIIKREVQYKNCIRRIKSLEEPLESYFKQKENSFRIEDIHLQYEKLKLVKEKSHSSPLRMLIPLERILSLPDLQSFSYASPLSFNDQDIMAIKEYKASIAASDSKSKARSSDRPNNVDEQQVTKKDSLKVIKTTKNAHKLEIQTKKFNHEIPHIHVDTKDKDEFNYVKYVLEISGLTSNESLSSWHAKDTPLDPSLYEEMENDPEFCSHKGGQCNHHVLFDLINETMLEIYGRSHCCPPIGCHILHKVWTHMSKSLGLRYKVDQTIDDHVGRDFSSKSDGWVNHHIYDECVGLEIEDMIFHDLLEEIMLDLACL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02687 651 PANTHER PROTEIN TRM32 310 417 IPR044257 -
Car06g02687 651 PANTHER PROTEIN TRM32 420 651 IPR044257 -
Car06g02687 651 PANTHER DUF4378 DOMAIN PROTEIN 420 651 - -
Car06g02687 651 PANTHER DUF4378 DOMAIN PROTEIN 310 417 - -
Car06g02687 651 Pfam Domain of unknown function (DUF4378) 500 643 IPR025486 -
Car06g02687 651 MobiDBLite consensus disorder prediction 440 462 - -
Car06g02687 651 MobiDBLite consensus disorder prediction 443 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02687 Car-Chr6 35335699 35339308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02687 160 637 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 30.481 8.11e-49 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02687 - - cam:101499034 1321.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02687 06 35335699 35339308 Car06g02687 06 35335699 35339308 ECH