Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02684 atcccttgcacgacaattacaacaatcactccgatataaaaactatgttcgacattgtcctcgtcaaactaacgacatcgactgtgggtactatatattgcgattcatgaaggagattgttgatatgaatcaaactgtaatcccagaaacgtactatgacaattccagttcaacatactctgaaagagatctaattgaaataaaggaagattggtgtcaATTCGTGTGGTTCGTTCTTATTTCTAAGCACAAGAAAAGAGTAAAGATGGAGTTTATAAAAAGACTTCCAAAACGATTCCCAATCGGTCTACGGGTTCTCGTCCTTGATGTTGACACAACTCACCATCCCATCCTTCACGCAATGGGTAATCAATTTCTATACCAAGTTACCACTTGTTGCAAGCCTTCTGTTGCATTGAATCTTCTTTCCCAAACAGAATGCTCTTTTGATGTCATAATTGTTGATACTGATATGCAAGAATTGAGTGCTTATGACTTTCTTGAACATATTCTCTTATTCCACAAAATTCCTGTCATTTTCATGTCTTCTGATTACTCTACAAATTCTATCATGGAGGCTATCACAAAAGGGGCTTCTGATTATTGGATTAAGCCTTTGGAAGAACAAGAATTCAAGAATATGTGGAAAAAACGGGGGAGAGAAGACGAGTTCAATGTTCCAAAACAAGGTATTGATTCTGAAGATGAAAAGCATAATCATAATGATGATTATCCACCGGCGACAAAGAAGTTCCGGTTTTCATGGAATCAACAGTTTCATAATCAATTTGTAATTGTTGTCAATCAATTAGGCCTTGATAATGTAAAGCCGAAACAAATACTAAAAATTATGGATGTTCCGGGTTTAACCCGAGAACACGTTGCTAGCCATTTGCAGAAATTGAGAAATAAATTGAAGTAA 922 0.2766 SLARQLQQSLRYKNYVRHCPRQTNDIDCGYYILRFMKEIVDMNQTVIPETYYDNSSSTYSERDLIEIKEDWCQFVWFVLISKHKKRVKMEFIKRLPKRFPIGLRVLVLDVDTTHHPILHAMGNQFLYQVTTCCKPSVALNLLSQTECSFDVIIVDTDMQELSAYDFLEHILLFHKIPVIFMSSDYSTNSIMEAITKGASDYWIKPLEEQEFKNMWKKRGREDEFNVPKQGIDSEDEKHNHNDDYPPATKKFRFSWNQQFHNQFVIVVNQLGLDNVKPKQILKIMDVPGLTREHVASHLQKLRNKLK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02684 306 SMART REC_2 103 215 IPR001789 GO:0000160
Car06g02684 306 Gene3D - 2 97 - -
Car06g02684 306 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 98 306 - -
Car06g02684 306 ProSiteProfiles Response regulatory domain profile. 104 219 IPR001789 GO:0000160
Car06g02684 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 250 304 IPR006447 GO:0003677
Car06g02684 306 Gene3D - 247 306 - -
Car06g02684 306 SUPERFAMILY Homeodomain-like 248 306 IPR009057 -
Car06g02684 306 SUPERFAMILY Cysteine proteinases 10 42 IPR038765 -
Car06g02684 306 Gene3D - 103 241 - -
Car06g02684 306 Pfam Response regulator receiver domain 106 214 IPR001789 GO:0000160
Car06g02684 306 PANTHER TWO-COMPONENT RESPONSE REGULATOR 98 306 IPR045279 GO:0009736
Car06g02684 306 CDD REC_typeB_ARR-like 105 216 - -
Car06g02684 306 MobiDBLite consensus disorder prediction 223 243 - -
Car06g02684 306 SUPERFAMILY CheY-like 103 218 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02684 Car-Chr6 35288117 35294798 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02684 98 306 Response Regulator Gene Family AT4G31920 36.681 6.14e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car06g02684 Response_reg 4.8e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02684 - K14491 cam:101496941 434.491