Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02680 ATGtcttctcattactctacaaattctgtcatggaggctatcacaaaagGGGCTTCTGATTATTGGATTAAGCCATTGGAAGAACAACACTTCCAGACTATGTGGAAGCATGTCGTAAAAGGACTTATTATTAATGAAAATCAAAATATGAACGACATCTTCCATATGAACAACAAACGGGGAAAAGAACAAGTCGATGTTCCAAAACAAACAATTGATGAAAACCATAATCATAATGATGATTATCCATCCCCGGCAAAGAAGTTCCGGTGGTCATGGACTCAACAGTTGCATAATCAATTCGTAACAGTGGTCAATGAATTAGGCCTTGAAAATGCAAAGCCCAAAAAAATACTCAAAATAATGGGTGTTCCGGGTTTAACCCGAGAAAACATTGCTAGCCATTTGCATGTTCGATTCTTTTTTCCCGAATTTATTAAGTGGATAACCCACATTGGACTTGAGATGGAAGACGCGGGAGCTGCGGAAATTGGGGATATCATAGTGTGA 510 0.3529 MSSHYSTNSVMEAITKGASDYWIKPLEEQHFQTMWKHVVKGLIINENQNMNDIFHMNNKRGKEQVDVPKQTIDENHNHNDDYPSPAKKFRWSWTQQLHNQFVTVVNELGLENAKPKKILKIMGVPGLTRENIASHLHVRFFFPEFIKWITHIGLEMEDAGAAEIGDIIV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02680 169 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 141 IPR045279 GO:0009736
Car06g02680 169 SUPERFAMILY Homeodomain-like 87 140 IPR009057 -
Car06g02680 169 Pfam Myb-like DNA-binding domain 92 137 IPR001005 -
Car06g02680 169 Gene3D - 85 140 - -
Car06g02680 169 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 1 141 - -
Car06g02680 169 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 139 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02680 Car-Chr6 34981980 34983216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02680 1 137 Response Regulator Gene Family AT4G31920 39.716 1.28e-22 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g02680 Myb_DNA-binding 7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02680 - K14491 cam:101509115 272.322