Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02679 ATGGCGCTAACAATACTACCAGAAAGATTCCCAATTGGTCTACGGGTTCTCGCCCTTGATGTTGACACAACTCACCATCCCATCCTTCACGCAATGGGTAATCGATTTCAATACCAAGTCATGTCTTCTCATTACTCTACCAATTCTGTCATGGAGGCTATCACAAAAGGGGCTTCTGATTATTGGATTAAGCCATTGGAAGAACGACACTTCCAGACTATGTGGAAGCATGTCGTAAAAGACATCTTCCATATGAACAACAAAAGGGGAAGAGAACAAGTCGATGTTCCAAAACAAACAATTGATGAAAACCATAATCATAATGATGATTATCCATCCCCGCCAAAGAAGTTCCGGTGGTCATGGACTCAACAGTTGCATAATCAATTCGTAACAGTGGTCAATGAATTAGGCCTTGAAAATGCAAAGCCCAAAAAAATACTCAAAATAATGGATGTTCCGGGTTTAACCCGAGAACACGTTGCTAGCCATTTGCAGAAAATGAAATATAAATTAGAGAATGGAATGAAAAAACGTGGCAGAAAACAAAAATCGAATTCATCAGTTTTGTCTTCGTCAGTTGAAACACACTCAATCCTTGAACCTATTCACACACTTCACGAACATGAACAACAAGTAGAGTCTGACCAAATTTCTGGTGGACAGCAACGTATAAAGGAATTCTGCGATGATCCTTACGACATTTTTTACGACCTTCCAGAAGATTTATCTACGTTATTCTTTGGAGCTGGTGGACAGCAACATTTAAGCGACGATCCTTACGACATTTTTTACGACCTTCCAGAAGATTTATCTACGTTATTCTTTGGAGCATGTCCTCCCACTGAAGTTGATATATTGAGTGTGAAGATTGTTTCATTTCTGTTGTTTGAGCATATACTTGGTGTTTTTTCTGTTTTCAATTTAAAGggtatcatcaaatacttgtgcaaccacaagacagTTCACCAAGTTGCTCACTGGAGTTGCCTATGA 996 0.3775 MALTILPERFPIGLRVLALDVDTTHHPILHAMGNRFQYQVMSSHYSTNSVMEAITKGASDYWIKPLEERHFQTMWKHVVKDIFHMNNKRGREQVDVPKQTIDENHNHNDDYPSPPKKFRWSWTQQLHNQFVTVVNELGLENAKPKKILKIMDVPGLTREHVASHLQKMKYKLENGMKKRGRKQKSNSSVLSSSVETHSILEPIHTLHEHEQQVESDQISGGQQRIKEFCDDPYDIFYDLPEDLSTLFFGAGGQQHLSDDPYDIFYDLPEDLSTLFFGACPPTEVDILSVKIVSFLLFEHILGVFSVFNLKGIIKYLCNHKTVHQVAHWSCL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02679 331 Gene3D - 115 174 - -
Car06g02679 331 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 202 IPR045279 GO:0009736
Car06g02679 331 Pfam Myb-like DNA-binding domain 121 169 IPR001005 -
Car06g02679 331 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 40 202 - -
Car06g02679 331 SUPERFAMILY Homeodomain-like 115 173 IPR009057 -
Car06g02679 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 118 169 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02679 Car-Chr6 34951436 34956246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02679 8 173 Response Regulator Gene Family AT4G31920 31.304 4.63e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g02679 Myb_DNA-binding 6.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02679 - K14491 cam:101513198 392.504