Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02678 ATGGCGCTAACAATACTACCAGAAAGATTCCCAATTGGTCTACGGGTTCTCGCCCTTGATGTTGACACAACTCACCATCCCATCCTTCACGCAATGGGTAATCGATTTCAATACCAAGTCATGTCTTCTCATTACTCTACCAATTCTGTCATGGAGGCTATCACAAAAGGGGCTTCTGATTATTGGATTAAGCCATTGGAAGAACGACACTTCCAGACTATGTGGAAGCATGTCGTAAAAGACATCTTCCATATGAACAACAAAAGGGGAAGAGAACAAGTCGATGTTCCAAAACAAACAATTGATGAAAACCATAATCATAATGATGATTATCCATCCCCGGCAAAGAAGTTCCGGTGGTCATGGACTCAACAGTTGCATAATCAATTCGTAACGGTGGTCAATGAATTAGGCATTGAAAATGCAAAGCCCAAAAAAATACTCAAAATAATGGATGTTCCGGGTTTAACCCGAGAACACGTTGCTAGCCATTTGCAGCAAAGGGTTTCATGGTTCAAGTTTGTTGACCGCATATAG 537 0.4134 MALTILPERFPIGLRVLALDVDTTHHPILHAMGNRFQYQVMSSHYSTNSVMEAITKGASDYWIKPLEERHFQTMWKHVVKDIFHMNNKRGREQVDVPKQTIDENHNHNDDYPSPAKKFRWSWTQQLHNQFVTVVNELGIENAKPKKILKIMDVPGLTREHVASHLQQRVSWFKFVDRI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02678 178 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 169 IPR045279 GO:0009736
Car06g02678 178 Gene3D - 114 173 - -
Car06g02678 178 SUPERFAMILY Homeodomain-like 116 172 IPR009057 -
Car06g02678 178 SUPERFAMILY CheY-like 40 87 IPR011006 -
Car06g02678 178 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 118 167 IPR006447 GO:0003677
Car06g02678 178 Pfam Myb-like DNA-binding domain 121 167 IPR001005 -
Car06g02678 178 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 40 169 - -
Car06g02678 178 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 121 173 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02678 Car-Chr6 34876171 34881631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02678 8 176 Response Regulator Gene Family AT4G31920 31.624 1.50e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g02678 Myb_DNA-binding 7.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02678 - K14491 cam:101513198 346.665