Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02671 ATGGCGCTAACAATACTACCAGAAAGATTCCCAATTGGTCTACGGGTTCTCGCCCTTGATGTTGACACAACTCACCATCCCATCCTTCACGCAATGGGTAATCGATTTCAATACCAAGTTACCACTTGTTGCATGCCTTCTTTTGCGTTCAATCTTCTTTCCCAAACAAAATGCTCTTTTGATCTCATAATTGTTGATACTGATATGCAAGAATTGCGTACTGTTTATCACTTTCTTGAACATGTTCTCTTATTCCACCAAATTCCTGTTATTTTCATGTCTTCTCATTACTCTACCAATTCTGTCATGGAGGCTATCACAAAAGGGGCTTCTGATTATTGGATTAAGCCATTGGAAGAACGACACTTCCAGACTATGTGGAAGCATGT 389 0.3985 MALTILPERFPIGLRVLALDVDTTHHPILHAMGNRFQYQVTTCCMPSFAFNLLSQTKCSFDLIIVDTDMQELRTVYHFLEHVLLFHQIPVIFMSSHYSTNSVMEAITKGASDYWIKPLEERHFQTMWKH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02671 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 129 IPR045279 GO:0009736
Car06g02671 129 Pfam Response regulator receiver domain 28 125 IPR001789 GO:0000160
Car06g02671 129 Gene3D - 12 129 - -
Car06g02671 129 ProSiteProfiles Response regulatory domain profile. 15 129 IPR001789 GO:0000160
Car06g02671 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 11 129 - -
Car06g02671 129 SUPERFAMILY CheY-like 14 127 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02671 Car-Chr6 34582254 34583036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02671 8 129 Response Regulator Gene Family AT2G25180 39.344 5.03e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car06g02671 Response_reg 3.2e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02671 - - cam:101496941 216.083