Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02669 ATGAACAACAAACGGGGAAAAGAACAAGTCGATGTTCCAAAACAAACAATTGATGAAAACCATAATCATAATGATGATTATCCATCCCCGGCAAAGcactacgcgaaaaatgtgAAGAAGTTCCGGTGGTCATGGACTCAACAGTTGCATAATCAATTCGTAACAGTGGTCAATGAATTAGGCCTTGAAAATGCAAAGCCCAAAAAAATACTCAAAATAATGGGTGTTCCGGGTTTAACCCGAGAAAACATTGCTAGCCATTTGCATGTTCGATTCTTTTTTCCCGAATTTATTAAGTGGATAACCCACATTGGACTTGAGATGGAAGACGCGGGAGCTGCGGAAATTGGGGATATCATAGTGTGA 366 0.3798 MNNKRGKEQVDVPKQTIDENHNHNDDYPSPAKHYAKNVKKFRWSWTQQLHNQFVTVVNELGLENAKPKKILKIMGVPGLTRENIASHLHVRFFFPEFIKWITHIGLEMEDAGAAEIGDIIV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02669 121 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 36 89 IPR044841 GO:0003700|GO:0006355
Car06g02669 121 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 41 91 IPR006447 GO:0003677
Car06g02669 121 MobiDBLite consensus disorder prediction 1 32 - -
Car06g02669 121 Gene3D - 37 92 - -
Car06g02669 121 Pfam Myb-like DNA-binding domain 44 89 IPR001005 -
Car06g02669 121 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 36 89 - -
Car06g02669 121 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02669 Car-Chr6 34556114 34559099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02669 35 89 Response Regulator Gene Family AT3G16857 63.636 1.25e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g02669 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02669 - K14491 cam:101509115 160.229