Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02665 ATGGCGCTAACAATACTACCAGAAAGATTCCCAATTGGTCTACGGGTTCTCGCCCTTGATGTTGACACAACTCACCATCCCATCCTTCACGCAATGGGTAATCGATTTCAATACCAAGTCATGTCTTCTCATTACTCTACAAATTCTGTCACGGAGGCTATCACAAAAGGGGCTTCTGATTATTGGATTAAGCCATTGGAAGAACGACACTTCCAGACTATGTGGAAGCATGTCGTAAAAGACATCTTCCATATGAACAACAAAAGGGGAAGAGAACAAGTCGATGTTCCAAAACAAACAATTGATGAAAACCATAATCATAATGATGATTATCCATCCCCGCCGACAAAGAAGTTCCGGTGGTCATGGACTCAACAGTTGCATAATCAATTCGTAACGGTGGTCAATGAATTAGGCATTGAAAATGCAAAGCCCAAAAAAATACTCAAAATAATGGATGTTCCGGGTTTAACCCGAGAACACGTTGCTAGCCATTTGCAGCAACGTTTAGAGGAATTCTGCGATGATCCTTACGACATTTTTTACGACCTTCCAGACGATTTATCTACTTCATTCTTTGGAGCTGGTGGACAGCAACCTTTAAAGGAATTTTGCGACGATCCTTACGACACTTTTTACGACCTTCCAGAAGATTTATCTACCTTATTCTTTGGAGCATGTCCTCCCACAGAAGTTGATATATTGAGTCTGTGA 714 0.4118 MALTILPERFPIGLRVLALDVDTTHHPILHAMGNRFQYQVMSSHYSTNSVTEAITKGASDYWIKPLEERHFQTMWKHVVKDIFHMNNKRGREQVDVPKQTIDENHNHNDDYPSPPTKKFRWSWTQQLHNQFVTVVNELGIENAKPKKILKIMDVPGLTREHVASHLQQRLEEFCDDPYDIFYDLPDDLSTSFFGAGGQQPLKEFCDDPYDTFYDLPEDLSTLFFGACPPTEVDILSL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02665 237 Gene3D - 115 172 - -
Car06g02665 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 40 170 IPR045279 GO:0009736
Car06g02665 237 Pfam Myb-like DNA-binding domain 122 169 IPR001005 -
Car06g02665 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 40 170 - -
Car06g02665 237 SUPERFAMILY Homeodomain-like 116 168 IPR009057 -
Car06g02665 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 174 IPR017930 -
Car06g02665 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 168 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02665 Car-Chr6 34446676 34448126 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02665 8 168 Response Regulator Gene Family AT2G25180 31.064 8.41e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g02665 Myb_DNA-binding 9.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02665 - K14491 cam:101513198 503.056