Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02654 ATGAACACAAAGACAATTTCTCCTTCTCATAATAATTCACTACTTCACTATTGTTGTAAGATTCTACTTGCTATTATGCTTTTTGGCTTGCAGATGTTATCTCACACTCAAGCATCTTGCTCAAAGTCAAAGGTTGAAGTGCTTGCTGGCTTTCAAGGTCTTCTTCCTTTTGAACTTGAAACAGGATATGTGGGGTTGGGAGAAACAGATGATGACATGCAAGTATTCTACTATTTTATCAAGTCAGAGAACAATCCTCAGAATGATCCTCTTATACTATGGTTAAGTGGTGGTCCTGGTTGCTCTTCTTTTTCTAGCCTTTTCTTTCAAATAGGTCCAATTGCATTTGAAATCAAAGAGTATGAAGGGAGCGTGCCTAGTTTGGTCTTGAGGCCACAATCCTGGACTAAGGCATCCAACATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATATAACTGCTCATCGAAGCGACTGGAAATTAGTTCACCATACTCATCAGTTTCTTAGGAAGTGGTTGATTGATCACCCTGAATTTCTTTCAAATAAATTCTACATTGGAGCTGATTCATACTCTGGCATTCCTATCCCCGTTGTTGTTCAAGAGATTTCAAATGGCAAGAAATTTCAAGGATATTTGCTGGGGAACCCCATAACAACACGAAATGAAAAAAATGATCAAATCCCATATGCTCACGGAATGGGACTCATATCTGATGAACTCTACGCGTCACTACAGAGAAATTGCAAAGGAGAGTATATTGATGTGGATTCCAAAAATGAGTTGTGTTTAAGAGATGTCCAGTACTTTCAAGAGTGCCTTTCAGGAATTGATACTCACAACATTTTGAATCGCTTATGTGAAGATGATGAGCATTTGTGGAGAAGATATTTAATTCAAGACATGAAGACATTTAGTTCTCATCTCAAAGTGCCTGAATTAAACTGCCCAAATTATGGTGCTTACCTTGCCGCTAAATGGGCTAATGACGAGCATGTTCGCAAGTCGTTGCATATTCGAGAGGGAACCATTGGGAAGTGGGAACGCTGTTACACTAGTGATTTCGAGGAAAATATCCCGAGTAGTGTGGAGTTTCATGTAAACCTAAGCATAAAAGGATACCGCTCTTTGATATACAGTGGGGATCATGATATTGTTGTACCTTTCACGTCTACTCAAGCATGGATAAGGGCTCTCAACTATTCTATTGTGGATGATTGGAGAGCATGGCTTGTAAATGGTCAAGTGGGAGGATATACAAGGACTTATTCGAATCAAATGACGTTCGCAACTGTAAAGGGTTCAGGACATACGGCTCCTGAGAATACTCCTGAGCAATGTTTTGCTATGTTCACTAGGTGGATATCTCATTTGTCTTTGTAA 1401 0.3919 MNTKTISPSHNNSLLHYCCKILLAIMLFGLQMLSHTQASCSKSKVEVLAGFQGLLPFELETGYVGLGETDDDMQVFYYFIKSENNPQNDPLILWLSGGPGCSSFSSLFFQIGPIAFEIKEYEGSVPSLVLRPQSWTKASNIIFVDLPLGTGFSYAKNITAHRSDWKLVHHTHQFLRKWLIDHPEFLSNKFYIGADSYSGIPIPVVVQEISNGKKFQGYLLGNPITTRNEKNDQIPYAHGMGLISDELYASLQRNCKGEYIDVDSKNELCLRDVQYFQECLSGIDTHNILNRLCEDDEHLWRRYLIQDMKTFSSHLKVPELNCPNYGAYLAAKWANDEHVRKSLHIREGTIGKWERCYTSDFEENIPSSVEFHVNLSIKGYRSLIYSGDHDIVVPFTSTQAWIRALNYSIVDDWRAWLVNGQVGGYTRTYSNQMTFATVKGSGHTAPENTPEQCFAMFTRWISHLSL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02654 466 Gene3D alpha/beta hydrolase 41 465 IPR029058 -
Car06g02654 466 SUPERFAMILY alpha/beta-Hydrolases 50 464 IPR029058 -
Car06g02654 466 Pfam Serine carboxypeptidase 53 462 IPR001563 GO:0004185|GO:0006508
Car06g02654 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 465 IPR001563 GO:0004185|GO:0006508
Car06g02654 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Car06g02654 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Car06g02654 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Car06g02654 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Car06g02654 466 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 19 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02654 Car-Chr6 33876009 33898353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02654 329 462 Calmodulin-binding Proteins AT2G22960 60.000 5.10e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02654 K16296 - gmx:100780069 690.649