Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02638 ATGGAACAGGATCAATGTTGGATTCAAACAAAGAGAAAGCACTCATCAATGAGTTCAAATCTTGTTTCTTCACTAGCTAATAACCTTTCTTCTTCTACTTCTTGTTATGGTGATTCATGGGAAGAACAAGCTTTTGCTGAAGATTCAGCATGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTAAAACAACCTTCTAGTGATCCACAAAATGATCATCAAATTCTTTatcatcatcatcatcatcatcatcatcaagatcttgaatctcatcatcatcatcatAATCTTCAAAAGCCACTTTATCAAAGTTCAAATAATTCTTTGGCTAATTATAATAATAGCCTTTTCCCTTCTCCTAGTGTTTGTGGATTGGTTTATAAAACTAACCCTAATTGTGATCCTAATTTTGTTGCTTCAACTTCATCACTCTCACTTTCTAAACCTAATGAGGAAACCCTTATTCCATTTTATGATTCTCCTTTTCCTCACCACAACATAGTTTCTCATCTCAATTCATCTAAATCATGGCTAAATTTACATGGAGATGATAGATTTTGTTCATCAAATTTCCAACATGAAGTTGATCATAATATTGATAAAAAAGTTTCCAAGGGAATGGATTCTAGGTTTAGAGCTAAAGGGAGTGAAAATAATGATGAAAGTGATGTATCTATGAGTTTGAGTTTGGTTTTGTGTAGAACTCATCAACCTTTTCAATTTGAGAGTACTAAGGAGGAAGATTTGAATTGCAAGAAGAGGAAAATTGATGCTTCATCAAATCTATTATTATCAAAGTCAAGTTCTTTTGATAAACAACATATGCAAGCAAAGATGTTTGATTTTAGCCCTAGCTCAATTGATGAGCTGGATCTGGAATTAAGGCTTGGTACAAAGTCCAAGGTATAG 984 0.3161 MEQDQCWIQTKRKHSSMSSNLVSSLANNLSSSTSCYGDSWEEQAFAEDSACIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSDPQNDHQILYHHHHHHHHQDLESHHHHHNLQKPLYQSSNNSLANYNNSLFPSPSVCGLVYKTNPNCDPNFVASTSSLSLSKPNEETLIPFYDSPFPHHNIVSHLNSSKSWLNLHGDDRFCSSNFQHEVDHNIDKKVSKGMDSRFRAKGSENNDESDVSMSLSLVLCRTHQPFQFESTKEEDLNCKKRKIDASSNLLLSKSSSFDKQHMQAKMFDFSPSSIDELDLELRLGTKSKV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02638 327 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Car06g02638 327 SMART c2h2final6 58 80 IPR013087 -
Car06g02638 327 Pfam C2H2-type zinc finger 58 82 - -
Car06g02638 327 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Car06g02638 327 MobiDBLite consensus disorder prediction 79 98 - -
Car06g02638 327 PANTHER OS07G0101800 PROTEIN 1 326 - -
Car06g02638 327 SUPERFAMILY beta-beta-alpha zinc fingers 55 84 IPR036236 -
Car06g02638 327 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02638 Car-Chr6 33114933 33116171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02638 41 99 C2H2 Transcription Factor Family AT5G06070 66.154 1.24e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02638 - - mtr:MTR_4g021270 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02638 06 33114933 33116171 Car02g01584 02 43553228 43554024 ECH
Car06g02638 06 33114933 33116171 Car06g02638 06 33114933 33116171 ECH