Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02625 ATGGGGGCTCGTTGCTCTAAATTCTCTTTCTGTTGGTTCCACTCTCACCTTAAACCTTCTGTTCTTGAATCCTCTGACCAAGAAAATGGTGGCAAGAGTGAAAAAAACTTGTGGCCTAGTTTTTGTGAGTATAGTTTGGATGAATTGAAGGCTGCTACAGATGGGTTCTCCTCAGAAAACATAGTCTCCGAGCATGGTGAGAAAGCTCCAAATGTTGTTTACAAAGGGAAACTTGAGAATGGAAAGTTGATCGCCGTCAAACGTTTCAACAAGTTCGCTTGGCCTGATTCTCGACAATTCATCGAAGAAGCTAAACAAGTGGGGAACCTTAGAAGTGAACGTTTAGCAAATTTGATTGGTTGTTGCTATGAAGGGGATGAGAGGCTGCTAGTGGCAGAGTTTATGCCACATGAAACTCTTGCTAAGCATCTCTTTCATTGGGAGGCTCAGCCTATGAAATGGGCAATGAGGTTGAGGGTGGCCTTCTATTTAGCTCAAGCTCTAGAATATTGCACAAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGGATCTTGTTTGATCAGGATGGTAATCCAAGGTTATCTTGCTTTGGGCTTATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTCACCCCTCCTGAGTACTTAAGGACTGGTAGAGTGACAGCAGAGAGTGTGGTTTACAGTTTTGGAACTCTGTTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGATCTGATACGTGGGAAAAACTATTTGATGTTGATGGATTCAGCATTAGAGGGTCATTTTTCAAAGGATGATGGAACTGAGTTAGTTCGTTTGGCTTCACGTTGTTTACAATATGAAGCTCGTGAGAGACCAAATGCAAAGTCTCTTGTTGAATCACTTATGTCACTTCAGAAAGAAACTGAGGTACCCTCACATATTCTAATGGGTCTTCAACAAGAAACAGCCTCCTCAACAAAGCCATTATCATTAACATCTTTTGGAGAATCATGTTTGAGATTGGATCTTACTGCTATACATGCAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGCATTGCCAATGAGCTTTCCTTTCAATTGTGGACAAGTCAAATGCAAGAGACCTTGAATTTGAAGAAGCATGGAGATGCTGCTTTTAGAGCTAAGGACTTTGTCACAGCCATTGACTGCTACACACAATTCATAGATGGAGGAACCATGGTGTCACCTACAGTATATGCAAGGAGATGCTTGTCATATTTGATGAATGACATGCCACAAGAAGCTCTAGGGGATGCAATGCAAGCTCAAGTGGTATCTCCTGAGTGGCCTACATCTTTGTATCTTCAAGCAACTTGTCTTTTCAGCCTTGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGGAACTAACATGGAAGCCAAAAAACATAAAAATTGA 1476 0.4146 MGARCSKFSFCWFHSHLKPSVLESSDQENGGKSEKNLWPSFCEYSLDELKAATDGFSSENIVSEHGEKAPNVVYKGKLENGKLIAVKRFNKFAWPDSRQFIEEAKQVGNLRSERLANLIGCCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNYLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVESLMSLQKETEVPSHILMGLQQETASSTKPLSLTSFGESCLRLDLTAIHAILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDAAFRAKDFVTAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWPTSLYLQATCLFSLGMENDAQETLKDGTNMEAKKHKN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02625 491 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 1 491 - -
Car06g02625 491 SUPERFAMILY TPR-like 387 480 IPR011990 GO:0005515
Car06g02625 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Car06g02625 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Car06g02625 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02625 491 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Car06g02625 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Car06g02625 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Car06g02625 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02625 Car-Chr6 32456970 32463341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02625 44 310 Glycoside Hydrolase AT3G07070 35.254 6.96e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Car06g02625 PK_Tyr_Ser-Thr 2.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02625 - - gmx:100814477 933.324