Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02617 ATGGATGCTGTAAATGAAGTTGCTGAACAGGATTTTGCTTCACAGAAGAAGAAGCCACCTTCTGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGTGGAGGTGATTCTGGACCTTCAGATGGTGACCAGGTTATCTATCATTCCACAATTCGAACTTTGGATGGAGTAGTTGTAGAATCTACCCGATCAGAACATGGAGGAAAGGGCATTCCCATAAGACATGTATTGGGTAAAAGCAAAATGCTATTGGGCTTGCTTGAAGGAATTACAACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATGGTTTTCCTAAGGATGATGAACTCCATTTTGAAATTGAGCTGATAGAGTTTTTCAAGGCCAAGGTTATCACTGATGATTTGGAAGTGATAAAAAAGGTTGTACGTGAAGGGCAGGGTTGGGAATCTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCGAAGACAGTTGCTGGGAAATTGCTCATGTCACACACAGAAGGAGAGCCATACTTCTTTACCTTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATCGGAACAATGGTTCGGGAAGAGAAAGCTGTTATATATGTTACAAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTTATAGAAGATTCTGAAGTCCAGTTTGAAGTGGAGATTGTTCACTTTATTCAAGTGAGGGACGTGCTTGGAGATGGGCGCTTGATAAAACGCCGTATTCGTGATGGCAAAGGTGATTTTCCAATGGATTGCCCTCTTCATGACAGTCTACTTCGTGTTCATTACAAGGGCACTGTTCTAAATGAAGAAAAGGCGGTGTTCTATGACACAAGAGTTGACAACGATGGTCAACCATTGGAATTCTGTTCTGGAGAAGGGCTTGTACCACAAGGATTTGAAATGTGTGTTCGTCTGATGCTACCAGGAGAGATGGCTCTTGTCACATGTCCGCCAGACTATGCTTATGATAACTTTCTAAGGCCTTCAAAGGTCCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTATCTTTTGAAATGCCAAAGGACTGGACAGGATTGAACTTCCAAAGTATAATGAACGAAGCTGAAAATATCAGAAACACGGGTAACAGGTTATTCAAAGAGGGAAAATATGAGCTTGCAAAGGCAAAATATGAAAAGGTTCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGAGGAAGGAAAAGTTTTTGCAAATACACGCAATTTGCTACACCTGAATGTTGCTGCATGCTATCTAAAGCTGGGAGAATGTAGAAAGTCCATTGAGACTTGCAATAAGGTTCTAGAAGCAAATCCTGCACACGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCAAGGGGTGATTTCAAAATGATGATGAAAGTCGATAAATCAACTGAATCAGATGCAACTGCAGCTCTTTCAAAACTGAAGCAGAAAGAGCAGGTGTGCTTGAAATTACCAATCAGTTATTCTTCTGTATGCTTGAGACGTCACATAAGGAAACACTCAGGGCCTGTTTGA 1677 0.418 MDAVNEVAEQDFASQKKKPPSEDEKRKKKIVPGSLMKALMRPGGGDSGPSDGDQVIYHSTIRTLDGVVVESTRSEHGGKGIPIRHVLGKSKMLLGLLEGITTMLKGEVAMFKMKPQLHYGEDDCPISAPDGFPKDDELHFEIELIEFFKAKVITDDLEVIKKVVREGQGWESPREPYEVKAWISAKTVAGKLLMSHTEGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVIEDSEVQFEVEIVHFIQVRDVLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTVLNEEKAVFYDTRVDNDGQPLEFCSGEGLVPQGFEMCVRLMLPGEMALVTCPPDYAYDNFLRPSKVPEGAHIQWEIELLSFEMPKDWTGLNFQSIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFANTRNLLHLNVAACYLKLGECRKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARGDFKMMMKVDKSTESDATAALSKLKQKEQVCLKLPISYSSVCLRRHIRKHSGPV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02617 558 Gene3D - 2 150 IPR046357 GO:0003755
Car06g02617 558 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Car06g02617 558 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Car06g02617 558 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 257 IPR001179 GO:0003755
Car06g02617 558 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 49 145 IPR001179 GO:0003755
Car06g02617 558 Gene3D - 151 262 IPR046357 GO:0003755
Car06g02617 558 MobiDBLite consensus disorder prediction 11 31 - -
Car06g02617 558 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 261 IPR001179 GO:0003755
Car06g02617 558 Gene3D - 263 387 IPR046357 GO:0003755
Car06g02617 558 SUPERFAMILY FKBP-like 266 389 - -
Car06g02617 558 SUPERFAMILY TPR-like 398 517 IPR011990 GO:0005515
Car06g02617 558 Gene3D Tetratricopeptide repeat domain 388 536 IPR011990 GO:0005515
Car06g02617 558 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 69 533 IPR031135 GO:0030154|GO:0042761|GO:0099402
Car06g02617 558 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 148 IPR001179 GO:0003755
Car06g02617 558 MobiDBLite consensus disorder prediction 1 51 - -
Car06g02617 558 SUPERFAMILY FKBP-like 153 260 - -
Car06g02617 558 SMART tpr_5 450 483 IPR019734 GO:0005515
Car06g02617 558 SMART tpr_5 401 434 IPR019734 GO:0005515
Car06g02617 558 SMART tpr_5 484 517 IPR019734 GO:0005515
Car06g02617 558 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 69 533 - -
Car06g02617 558 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Car06g02617 558 SUPERFAMILY FKBP-like 25 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02617 Car-Chr6 32172902 32189008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02617 35 556 Calmodulin-binding Proteins AT5G48570 29.644 1.61e-62 214