Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02604 ATGGCAGTCACACTCTACAACCTTAAGTCTGAATCTGGGTTGAAGAAACTTGATGAGTACCTTCTCACACGCAGTTATATCAGTGGATACCAAGCTTCAAAGGATGATATCACTGTCTATTCAGCTTTGTCATCAGTTCCATCAGATGAATTTGTGAATGTGTCTAGATGGTACAAGCACATTGATGCTTTGTTGAGAATTTCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTGGAGTCATCCTCTCTTGTTGCTGAAGAGGCTGTTGCTACTCCTCCAGCTGCTGACTCCAAGGCTACTGAAGCAGAGGATGACGATGACGATGACGATGTTGATTTGTTTGGTGAAGAGACAGAGGAAGAGAAGAAGGCAGCTGAGGATCGTGCAGCGGCCATGAAGGCATCTGGCAAAAAGAAAGAGAGTGGGAAATCATCTGTTCTGATGGATGTGAAGCCATGGGATGATGAAACCGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTAGAGATGGAAGGGTTGTTCTGGGGTGCATCAAAACTTGTTCCTGTTGGGTACGGTATCAAGAAACTGCAAATTATGCTTTCTATTGTGGATGACCTGGTTTCTGTTGACACTCTTATTGAGGAACGTCTTACTGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGTTGCCTTCAACAAAATAT 700 0.4386 MAVTLYNLKSESGLKKLDEYLLTRSYISGYQASKDDITVYSALSSVPSDEFVNVSRWYKHIDALLRISGVSGEGSGVTVESSSLVAEEAVATPPAADSKATEAEDDDDDDDVDLFGEETEEEKKAAEDRAAAMKASGKKKESGKSSVLMDVKPWDDETDMKKLEEAVRSVEMEGLFWGASKLVPVGYGIKKLQIMLSIVDDLVSVDTLIEERLTVEPINEYVQSCDIVAFNKI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02604 233 CDD EF1B 142 233 IPR014038 GO:0003746|GO:0006414
Car06g02604 233 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 233 - -
Car06g02604 233 SMART EF1_GNE_2 144 233 IPR014038 GO:0003746|GO:0006414
Car06g02604 233 Gene3D - 2 79 - -
Car06g02604 233 MobiDBLite consensus disorder prediction 87 113 - -
Car06g02604 233 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Car06g02604 233 Pfam EF-1 guanine nucleotide exchange domain 146 233 IPR014038 GO:0003746|GO:0006414
Car06g02604 233 SUPERFAMILY eEF-1beta-like 141 233 IPR036219 -
Car06g02604 233 Gene3D - 137 233 IPR014717 -
Car06g02604 233 Coils Coil 116 136 - -
Car06g02604 233 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 108 116 IPR001326 GO:0003746|GO:0005853|GO:0006414
Car06g02604 233 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 222 233 IPR001326 GO:0003746|GO:0005853|GO:0006414
Car06g02604 233 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02604 Car-Chr6 31845449 31847223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02604 7 233 Eukaryotic Initiation Factors Gene Family AT2G18110 83.260 1.40e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02604 K03232 - thj:104819764 325.865