Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02602 ATGAAACTTATGAAAACAATTTACAACGTGCGTGATGGCCATAGTGCAAGACTGCTGGTTCCTCAGATGCAAATACAATCCAAGCTGCCTTGTGTGAGAAGGGTTTGTATTCTGCCACATCTTTGCATTTGTACTTTCATGGAGACTTGCATTGGCAGCCGTACGACTCTCGGTCATGTTCATTGTTCCGGCACTCGTGTTTGGGAAGATCATGTTGATCAGTTCGGATTTCAATTGTCTGGTGGACAGAAGCAGCGCATCGCTATAGCTAGAGCTTTACTTAGGGATCCAAAGAAGCTGGAAGCACTTGTGGGGCATAGTGGTTGTGGTAAATCCACTATGATTGCTCTGATTGAAAGGCTTTATGGTCCTGTTAAGAGAATGGTATGCATAGATGAACAGGACACGTATTGCTTTGGAAAGTCAGGAACCAACCCTTTTCACAGAACTATTCGAGAAAACATTGCTATGGAAAAGAAAATGTACTGA 489 0.4315 MKLMKTIYNVRDGHSARLLVPQMQIQSKLPCVRRVCILPHLCICTFMETCIGSRTTLGHVHCSGTRVWEDHVDQFGFQLSGGQKQRIAIARALLRDPKKLEALVGHSGCGKSTMIALIERLYGPVKRMVCIDEQDTYCFGKSGTNPFHRTIRENIAMEKKMY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02602 162 Pfam ABC transporter 67 98 IPR003439 GO:0005524
Car06g02602 162 Gene3D - 102 136 IPR027417 -
Car06g02602 162 Gene3D - 72 98 IPR027417 -
Car06g02602 162 Pfam ABC transporter 100 136 IPR003439 GO:0005524
Car06g02602 162 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 69 98 IPR039421 -
Car06g02602 162 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 102 156 IPR039421 -
Car06g02602 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 98 IPR027417 -
Car06g02602 162 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY B (MDR/TAP), MEMBER 4 69 98 - -
Car06g02602 162 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY B (MDR/TAP), MEMBER 4 102 156 - -
Car06g02602 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02602 Car-Chr6 31803715 31804890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02602 99 156 Calmodulin-binding Proteins AT2G36910 40.580 3.52e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02602 K05658 - gmx:100788127 65.0846