Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02592 ATGGCTGATGAGGGTTTTGAAGGTTACCATGTCCCACAACAAAGTAGAAGAGATAAGCTTAGAGTTGTTGTGGCTCAAAACAAttcttcttcttgttcttcttctcttgttgttgaacctttacttcctttttatgactcttcttcttTTATTACTACCACAAATTTCACTTCAAATCAACACAACAACAATAATCAAAGTTTGAAACAAAACTTGTTCTCTTCTTCTATTAAGGATTTAGAATGTTCTAATTTTATGATGCGTGGAGAAGGAAAAAGGGTTATGAATATTTCTTCTTCTAACTCTTCTACAATTTCTCATCATCCTTATTTGGAACATTTGAAtaataatcaaggtaatattcaagttattaatagtaatagtagtagtagtaataataataatgttaataataataataataataaCCCTTTTTTCTATCAAGCACAAAACCTTCAAAATCTTAGAAATTTTGAAGAACAAAATAGTACTACTATGATGTTAAATCATGAACCTTTGTCTTTGTCACTTTCATCACACAAAAGTGGAAGTAATTTACCTTTGGAGTTAAATCTTGATCAAAGATATGGTTCTATGATTTATGGTAGTGGTGGTGTGATTCAAGGGTTGGTTGAAGGAGGAGGAAGTGGTGGATCAGTTCCATTTACTGGATATGCATCGGTGTTGAAGGATTCTAGGTTTTTGAAACCAGCACAACAATTGTTGGAAGAGATGTGTGATCTTGGAGGTCGTGGTGTTTGTGTTGAGAAAGTTGTGGTTGTTGGTGATTCATCTTTGATGATGGAATCTCCTTTAGAGAGATTGTGTGAAGAAGATTCATTTGGAGATCATAGTGGTGGTGAAGGTCGCAATAAGTCAAGATTGTTGACTATGCTTGATGAGGTTTACAAGAGGTATAGACAATACTACCAACAGATGCAATCGGTAGTAACATCGTTCGAGTATGTTTCGGGACTAAACAACGCAGCTCCTTATGCAAGTTTGGCGATAAAATCCATGTCAAAGCATTTTAGATGTTTGAAGAAGGCAATTACTGACCAACTTCAGTTCAACAATAAGGCTCATTTTCACACAAGCATTAGGAAAGACGAATCTCCGAGATTTGGCAGTAGTGAAAGAGGAGGGCCTTATAGCCATAGGTCAGGTTTTCTTGATCAGCAACAACCTGTTTGGCGGCCTCAAAGAGGACTCCCCGAGCGTGCTGTCACTGTTCTTAGAGCATGGCTGTTTGAGCACTTTCTGCATCCCTATCCTACAGATACCGACAAGATAATGTTGGCGAAACAAACTGGTCTATCGCGCAGCCAGGTGTCTAATTGGTTCATTAATGCAAGAGTAAGGCTTTGGAAACCAATGGTTGAAGAAATACACATGCTAGAAACAAGGCAAGCTCCAAAAGATTCACAAAAGGAAGAACATTTTCGAAACAAATCTAATGATCATCATTTATCTTCAAATACTTCTCTAGTTTCGGAGAATCCGTCTCCCTCGACCGATAAGTTTCACGATGGAACTTACAAGCGTGTCGTAAATGAAATTCCTAACATATCAATTCGGCGTCAAGGacaacaacaacaacaacaaATGAATTTACCTCTTCAACAAGTAGGTGTTGGAATGAGCATGGGAAGTGGGAGCAGCaataataataataataataataataataataataatagtaataatattaataataatagtaatGTGTCATTGACACTAGGACTTTATCAAAATCATGGCATTGGTTTAGCTGAACCATTTCCATTAAGTGCAGCTCAACGTTTTGGTATTGGTCTTGAAACCAATAATGAAGGTTATAATGTTATGAGTGGGTTTGAAACACAAAATAGGCATTTTGGAAGAGATGTTATTGGAGGCCAAATGTTCCATGACTTTGTAGGATGA 1926 0.3396 MADEGFEGYHVPQQSRRDKLRVVVAQNNSSSCSSSLVVEPLLPFYDSSSFITTTNFTSNQHNNNNQSLKQNLFSSSIKDLECSNFMMRGEGKRVMNISSSNSSTISHHPYLEHLNNNQGNIQVINSNSSSSNNNNVNNNNNNNPFFYQAQNLQNLRNFEEQNSTTMMLNHEPLSLSLSSHKSGSNLPLELNLDQRYGSMIYGSGGVIQGLVEGGGSGGSVPFTGYASVLKDSRFLKPAQQLLEEMCDLGGRGVCVEKVVVVGDSSLMMESPLERLCEEDSFGDHSGGEGRNKSRLLTMLDEVYKRYRQYYQQMQSVVTSFEYVSGLNNAAPYASLAIKSMSKHFRCLKKAITDQLQFNNKAHFHTSIRKDESPRFGSSERGGPYSHRSGFLDQQQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKIMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAPKDSQKEEHFRNKSNDHHLSSNTSLVSENPSPSTDKFHDGTYKRVVNEIPNISIRRQGQQQQQQMNLPLQQVGVGMSMGSGSSNNNNNNNNNNNNSNNINNNSNVSLTLGLYQNHGIGLAEPFPLSAAQRFGIGLETNNEGYNVMSGFETQNRHFGRDVIGGQMFHDFVG 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02592 641 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 33 615 - -
Car06g02592 641 SMART prehox3 223 353 IPR006563 -
Car06g02592 641 MobiDBLite consensus disorder prediction 468 510 - -
Car06g02592 641 MobiDBLite consensus disorder prediction 368 390 - -
Car06g02592 641 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
Car06g02592 641 SMART HOX_1 398 462 IPR001356 GO:0003677
Car06g02592 641 SUPERFAMILY Homeodomain-like 400 465 IPR009057 -
Car06g02592 641 Pfam Associated with HOX 228 352 IPR006563 -
Car06g02592 641 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Car06g02592 641 CDD homeodomain 398 459 IPR001356 GO:0003677
Car06g02592 641 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 33 615 - -
Car06g02592 641 MobiDBLite consensus disorder prediction 468 487 - -
Car06g02592 641 MobiDBLite consensus disorder prediction 488 507 - -
Car06g02592 641 MobiDBLite consensus disorder prediction 545 572 - -
Car06g02592 641 Gene3D - 401 463 - -
Car06g02592 641 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02592 Car-Chr6 31370459 31375149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02592 165 468 Homeobox Transcription Factor Family AT5G02030 57.680 1.20e-102 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Car06g02592 POX 7.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02592 - - cam:101498314 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02592 06 31370459 31375149 Car06g02592 06 31370459 31375149 ECH