Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02590 ATGGAACCTGAAAAACCTACCGTAACGGCGGACCCCGATGGAAGCGGCGACGAAGGTTTAATTGCATtaacggaaagtggaaacagtaacggtaacggtaGAGACAGAGTGAAAGGTCCTTGGTCACCTGAAGAAGACGCCATTCTCAGTCGTCTTGTAAGTCAGTTCGGTGCAAGAAACTGGAGTCTTATTGCTCGTGGGATCGCCGGAAGATCCGGTAAGTCGTGTCGGCTCCGGTGGTGTAATCAACTTGATCCTGCTGTTAAGCGGAAACCCTTCACTGATGAGGAGGACCGGATCATAGTTTCTGCTCATGCAGTCCATGGAAACAAATGGGCAGCCATCGCCAGGCTTCTACCAGGAAGAACAGATAATGCAATTAAGAACCACTGGAATTCTACGTTGAGGCGTCGGGGAGTTGAACATGATAAGATTAAGTTAGAATCTGGTAACATGATAGAAGATATTAGCTTGGAGAAAGCCAAAGCATCATCAGAAGAAACTCTTTCATGTGGAGATGTTAATTCTTTGAAATCCTCAGAAGTAAGAGATGTTACGTCTATGGAGATCGTTGACGATAAGCACGAAGGCAAAGCACGGACTGATGGTCAATTATCCCATGAAGTCAGGGAACCACCTACCCTTTTTAAGCCCGTCGCACGCGTAAGTGCTTTTAATGTATATCAAGCTTTCAATAGTTCGCAACCTTCAACATCAGTTCAAAGACCTGTTCCAATGCATGGACCTATTTTACAATCGTCAAAACCAGATATGGATTTTTGTAAAATGCTTAATGGAACTCATGGCGACCGGTCAGTACCTCAACAGTGTGGTCATGGATGCTGTTCTCTAAATGGTAACAACTCAAAAAGTTCTTTGTTGGGACCAGAATTCATTGATTATTCAGAACCACCATCTTTCCCAAGTTTTGAGTTGGCTGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGAAAATGCTGGCAGGGTTAATTTCTAA 1041 0.4236 MEPEKPTVTADPDGSGDEGLIALTESGNSNGNGRDRVKGPWSPEEDAILSRLVSQFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVSAHAVHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGVEHDKIKLESGNMIEDISLEKAKASSEETLSCGDVNSLKSSEVRDVTSMEIVDDKHEGKARTDGQLSHEVREPPTLFKPVARVSAFNVYQAFNSSQPSTSVQRPVPMHGPILQSSKPDMDFCKMLNGTHGDRSVPQQCGHGCCSLNGNNSKSSLLGPEFIDYSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGENAGRVNF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02590 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 88 IPR017930 -
Car06g02590 346 SMART sant 37 86 IPR001005 -
Car06g02590 346 SMART sant 89 137 IPR001005 -
Car06g02590 346 MobiDBLite consensus disorder prediction 1 42 - -
Car06g02590 346 PANTHER MYB PROTEIN-RELATED 10 329 - -
Car06g02590 346 CDD SANT 92 135 IPR001005 -
Car06g02590 346 Pfam Myb-like DNA-binding domain 41 98 - -
Car06g02590 346 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Car06g02590 346 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Car06g02590 346 PANTHER - 10 329 - -
Car06g02590 346 Gene3D - 37 89 - -
Car06g02590 346 Gene3D - 92 138 - -
Car06g02590 346 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Car06g02590 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 139 IPR017930 -
Car06g02590 346 CDD SANT 40 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02590 Car-Chr6 31244897 31249556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02590 27 344 MYB Transcription Factor Family AT3G09230 52.584 8.05e-108 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car06g02590 Myb_DNA-bind_6 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02590 K09422 - gmx:100813406 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02590 06 31244897 31249556 Car06g02590 06 31244897 31249556 ECH