Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02568 ATGAGGTGTTTTACTGTTTTGAAGAGAAAGAAGAAAAAGTCTGACCAGATTGTGTATGTAAAACGCGTAAGCCCTGGCGATGATTCACCTACAGCTACAGTACTTCCTGAGCCGCAAGCTCATACTCGCTCACTCCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTTAAACCTATTCAACCCAGTAATAAAGTCAATATCAATAGAACAAGAACACTGTCTGCTCCATCGTCTCTTGATGAAGCAGAACAGCATACTTTCGCCTCAATCGAGTACGAGGAGCAAGCGTCAAAATACCGAGCTGGATCATTGAAGGAGCAGCGTTCTTCTAGTCCACAACCTTTACCACTACCATTTCCTAAGGGTGGTGGTACACTGAATACTGTTGGAAGCTTTAAGTTGGGGACAGCTAGTGGTCCTCTATTTTCTTCTGGACCTTTGCCGCTTCCACCTACTGGGTCGCTTCGAAACTTTTTGTATGACGAACTTGCTTCTGCTTGCCACAATTTCTCTTCAGATCGATACATGTCAGAATGTCTTTCGTCCACCATATATAAAGCTTCCTTTGGTGGTGATGATGCTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACACGCCTTCACCCATCACCTCAGAGCTTGAAGGAATTCATAAATGAGGTTAATACTATTGCATCTTTGCGGCATCCGAATCTATGTAGATTGCTAGGATTTCATGCACGTGATGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGTTTGGACCGTCTATTGTATGGTAGATCTGATGGACCGTCAATTGATTGGAATACAAGAATCAAAATTGCGATATGTGCTGCACAAGGTCTTTCTTTCTTGCATGAAGAAGGTCCTTTTCAGGCAATGTATAATGAATTCTCAACAACCAACGTACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATTTTCCCAAGGAAGAGATTTCAAGCAATTCATCTGCTGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAATGTATGGAGTTTCGGAATTTTTCTTCTAGAGCTACTCACAGGAAGAAAGAATCTCGATAGCCGTCACTCCAAGGAAGAGAGGAATTTGGTGAAGTGGAGCAAGCCTTTCCTATCTGATAATCATCGTTTGTCGATGATCATGGATCCTCAACTCAAAGGTCGCTTTCCTTCTAAAGCAGCGAGAACAATAGCCAACATTGCACAAAGATGCCTTCAAATGGAGCCATCAGACAGACCAACCATGGGAACTGTTGTTGAGCATCTAAAAAAGATACAGGATTTGAAGCATTCTTGCAGGTTCCCACTGCAAGAACCATCACAAATCTATGCAACACAAATGTCAAGATCACCAAGTTTGAATGGTATCATCCACCCTGCACCAAGGTCGAGTTTCTCTCCATCACCTTCATCCAGAGCCCTAGTATCTGTATCGCCTCCAAGATGGTCTGAAGTGTCCATTCAACTTCCGCTTCGTGCTTCTTCTTCAACCCTGTCTTTAGAAGAGCTAGAGAGGCAAGGAAGCCGCAAGTCGACATCCTCGGTGTCTAGGAAGGCTAGTGTTGAAGGattttga 1647 0.4335 MRCFTVLKRKKKKSDQIVYVKRVSPGDDSPTATVLPEPQAHTRSLQSAPPSFRTRVKPIQPSNKVNINRTRTLSAPSSLDEAEQHTFASIEYEEQASKYRAGSLKEQRSSSPQPLPLPFPKGGGTLNTVGSFKLGTASGPLFSSGPLPLPPTGSLRNFLYDELASACHNFSSDRYMSECLSSTIYKASFGGDDASSSKKFEATVTRLHPSPQSLKEFINEVNTIASLRHPNLCRLLGFHARDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRIKIAICAAQGLSFLHEEGPFQAMYNEFSTTNVQIDKDFSAKLSGYGCVGHFPKEEISSNSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHSKEERNLVKWSKPFLSDNHRLSMIMDPQLKGRFPSKAARTIANIAQRCLQMEPSDRPTMGTVVEHLKKIQDLKHSCRFPLQEPSQIYATQMSRSPSLNGIIHPAPRSSFSPSPSSRALVSVSPPRWSEVSIQLPLRASSSTLSLEELERQGSRKSTSSVSRKASVEGF 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02568 548 ProSiteProfiles Protein kinase domain profile. 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02568 548 PANTHER OS01G0822200 PROTEIN 48 547 - -
Car06g02568 548 MobiDBLite consensus disorder prediction 22 81 - -
Car06g02568 548 MobiDBLite consensus disorder prediction 522 548 - -
Car06g02568 548 Pfam Protein tyrosine and serine/threonine kinase 183 446 IPR001245 GO:0004672|GO:0006468
Car06g02568 548 Gene3D Transferase(Phosphotransferase) domain 1 254 465 - -
Car06g02568 548 MobiDBLite consensus disorder prediction 99 120 - -
Car06g02568 548 SUPERFAMILY Protein kinase-like (PK-like) 148 456 IPR011009 -
Car06g02568 548 MobiDBLite consensus disorder prediction 35 81 - -
Car06g02568 548 PANTHER OS01G0588500 PROTEIN-RELATED 48 547 - -
Car06g02568 548 Gene3D Phosphorylase Kinase; domain 1 151 252 - -
Car06g02568 548 MobiDBLite consensus disorder prediction 533 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02568 Car-Chr6 30610886 30615852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02568 149 450 Receptor kinase-like Gene Family AT4G02010 35.714 7.45e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Car06g02568 PK_Tyr_Ser-Thr 5.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02568 - - gmx:100808712 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01399 03 59265539 59269260 Car06g02568 06 30610886 30615852 PCT