Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02551 ATGATTAGAGGGGGGTGTAGCTTCGAAGAAAATGCTAGAATGGCACAAAATGCGGGCTACACAGCTGCAATTGTCTATGACAATGAAGATGGTGGCTTCCTGGTTGCAATGGCAGGAAATTATGCTGGTATAAGAATACATGTTGTATTTGTATCAAAAGCTTCGGGTTTAGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGAAACTAAGATGAATGAACTGCTTGCCAGTGATGGGCAAGAATTCTTCACCTCATATGATGAAGTCCATGATAGCTTTGATGCAATGGGGCTGCAAGAAAACCTTCTGCGAGGCATATATGCTTACGATTTTGAGAGGCCTTCTGCAATCTAG 360 0.4167 MIRGGCSFEENARMAQNAGYTAAIVYDNEDGGFLVAMAGNYAGIRIHVVFVSKASGLAPEGSQFDANHYETKMNELLASDGQEFFTSYDEVHDSFDAMGLQENLLRGIYAYDFERPSAI 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02551 119 Gene3D - 1 76 - -
Car06g02551 119 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 58 119 - -
Car06g02551 119 Pfam PA domain 6 57 IPR003137 -
Car06g02551 119 PANTHER - 58 119 - -
Car06g02551 119 SUPERFAMILY PA domain 2 50 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02551 Car-Chr6 30108619 30108978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02551 55 119 Eukaryotic Initiation Factors Gene Family AT3G13920 72.727 6.12e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02551 K03257 - cam:105852033 150.599