Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02539 ATGGACTTCATAAAAGTTGTCCCTCTCATTTCTTTTCTATATGCATGCATTCATATTATAGCCTTTGGCCTACTTTGCAAAAACAAAAAATCTCCTAAACTCCCACCAGGTCCTCCTAGTTATCCTTTAATAGGAAACATATTGCAACTTGGTCCTTCAAAACTCCACCAATCACTTACTAAACTCTCAAAAACATATGGACCAATTATGAGAGTTACAATTGGCACTATTACCACTATTGTAATTTCCTCTCCAAAAATAGCCAAAGAAGCACTTCATAAAAATGACCAAGCCTTGTCTAATAGATTTATACCTGAATCTGTCCAAGCACTTTCACATGATAAATCTTCTCTAATATTTATGCCTATCTCCCCAAAATGGAAGACCTTAAGAAAAATTTGTGCCACCAAAATATTCTCATCTCAACAACTTGATTCTACTCAATCACTTCGATTAGAAAAATTGAAAGAACTTGTTGTTTACTTAAAAGAAAATTGTGAAAAGGGTAAAGCTATTGATATTGGTGAGGTTGCATTTACTATATCTCTTAATTCAATATCAAACACTCTATTCTCCATTGACATGGCTAGCTTTGCTTCCAGTTCTTCACAAAATTTTAGAGACGTTATTTCCTCTATGTTGATCGAAGCTTCGAACCCGAATATCGCAGACTATTATCCGATTTTGCGTAGAATTGATCCACAAGGATCGCAGCGAAGGATGAAGAATTATTACCAGAAGTTGCTTACACTTTTTGAGTCTATAATTGAAGATAGAAGTAATCAAAGGAAAGATTGTGTGATGGAAGGAAGTGATGTGCTAGACTTGTTTCTCAATATGATTCGAAATGAAAATTCCGAATTGACAAAACATGATTTGTTACATCTTTTTCTGGACTTATTTATAGCTGGGACAGACACAACATCAGTCACAATTGAATGGACAATGGCAGAGTTGCTACAAAATCCAGAGAAATTGAAGAAAACAAGAAAGGAACTTCAAAAAGTAATCAACAAAGACGAAGGAGTTAAAGATTTAGATATCACTAATCTCCCTTACTTACAAGCAGTTGTAAAAGAAACCCTTAGGTTGCATCCATCAGCCCCTATATTAGTCCACAAATCAGTTTCTGAGGTTGAATTATGTGGTTTTAAGGTACCAAAAGATGCACAAGTTCTTGTGAATGTGTGGAGCATGGGAAGAGACTCTAGTATTTGGAATGATCCAAATTTGTTTGTACCTGAAAGATTTTTAGAAAGTGGAGATGTTTTTAGAGAAGAAGATTTTGGGTTCATTCCATTTGGAGCTGGGAGAAGAATGTGTCCTGGTGTTTCTTTTGCTCATAGGGTTGTGCATACCATGTTGGCCACAATGCTTTACCATTTTGATTGGAAGTTAGTTGATGAGGAAAAATGTGAAGACATTGACATGACTGAAAATTTTGGGGTTACTTTGCACAAAATCAAGCCTCTCATTGCTATTCCCATCAAAGAAGAATTAGAAAATAGTTATATAGTTTAA 1521 0.3504 MDFIKVVPLISFLYACIHIIAFGLLCKNKKSPKLPPGPPSYPLIGNILQLGPSKLHQSLTKLSKTYGPIMRVTIGTITTIVISSPKIAKEALHKNDQALSNRFIPESVQALSHDKSSLIFMPISPKWKTLRKICATKIFSSQQLDSTQSLRLEKLKELVVYLKENCEKGKAIDIGEVAFTISLNSISNTLFSIDMASFASSSSQNFRDVISSMLIEASNPNIADYYPILRRIDPQGSQRRMKNYYQKLLTLFESIIEDRSNQRKDCVMEGSDVLDLFLNMIRNENSELTKHDLLHLFLDLFIAGTDTTSVTIEWTMAELLQNPEKLKKTRKELQKVINKDEGVKDLDITNLPYLQAVVKETLRLHPSAPILVHKSVSEVELCGFKVPKDAQVLVNVWSMGRDSSIWNDPNLFVPERFLESGDVFREEDFGFIPFGAGRRMCPGVSFAHRVVHTMLATMLYHFDWKLVDEEKCEDIDMTENFGVTLHKIKPLIAIPIKEELENSYIV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02539 506 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Car06g02539 506 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 497 - -
Car06g02539 506 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Car06g02539 506 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 Gene3D Cytochrome P450 24 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 497 - -
Car06g02539 506 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02539 506 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02539 Car-Chr6 29766401 29769024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02539 9 502 Cytochrome P450 AT2G45550 42.346 5.31e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02539 - - lja:Lj0g3v0020129.1 620.542