Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02538 ATGGCAGAGTTGCTACAAAATCCTGAGAAATTGAAGAAAACAAGAAAGGAACTTCAAAAAGTAATCAACAAAGACGAAGGAGTTAAAGATTTAGATATCACTAATCTCCCTTACTTACAAGCAGTTGTAAAAGAAACCCTTAGGTTGCATCCATCAGCCCCTATATTAGTCCACAAATCAATTTCTGAGGTTGAATTATGTGGTTTTAAGGTACCAAAAGATGCACAAGTTCTTGTGAATGTGTGGAGCATGGGAAGAGACCCTAGTATTTGGAACGATCCAAATTTGTTTGTACCTGAAAGATTTTTAGAAAGTGGAGATGTTTTTAGAGAAGAAGATTTTGGGTTCATTCCATTTGGAGCTGGTAGAAGAATGTGTCCTGGTGTTTCTTTTGCTCATAGGGTTGTGCATACCATGTTGGCCACAATGCTTTACCATTTTGATTGGAAGTTAGTTGATGAGGAAAAATGTGAACACATTGACATGACTGAAAAATTTAGGGTTACTTTGCGCAAAGTCAAGCCTCTCATGGCTATTCCCATCTAA 546 0.3736 MAELLQNPEKLKKTRKELQKVINKDEGVKDLDITNLPYLQAVVKETLRLHPSAPILVHKSISEVELCGFKVPKDAQVLVNVWSMGRDPSIWNDPNLFVPERFLESGDVFREEDFGFIPFGAGRRMCPGVSFAHRVVHTMLATMLYHFDWKLVDEEKCEHIDMTEKFRVTLRKVKPLMAIPI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02538 181 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 181 - -
Car06g02538 181 SUPERFAMILY Cytochrome P450 1 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS E-class P450 group I signature 80 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS E-class P450 group I signature 116 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS E-class P450 group I signature 126 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 181 - -
Car06g02538 181 Pfam Cytochrome P450 2 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 Gene3D Cytochrome P450 1 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS P450 superfamily signature 117 126 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 PRINTS P450 superfamily signature 126 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02538 181 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 119 128 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02538 Car-Chr6 29724841 29725386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02538 1 181 Cytochrome P450 AT2G45550 51.648 2.75e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02538 - - cam:101510408 372.474