Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02533 ATGGATAGTGCAATCACCGGAAGCAGAAGCGAACACATCGGCGTGACGAGGGTTCCAAACGGAGGAATAAACACACCACAAGATGCATACGGGCTAGAGAAGCTTGCAACAGAGGAGATATGCAAACACTATAATAAAGCTTTTGGAATTGAGTGTCGTATTGGGAGGTTCCATAACATATATGGTCCTTTTGGGACATGGAAAGGCTCGTTTCGGGCAGCAGACGGTAAAGAGGGAAAATGGTTAATTCGCGGCAGTAGCAGTCGAGTAAACGTTTCAGGCAAAGAGTTGTTGGTTTTACATTGCAGCTTATTAGAGCTAGAGCCTTCATACATTTATGCTTTCTATCCATTGCAGAACTTCAATTCAGAGGATAATGTATTTGGGCAGCTGCAATGGAAAATTTGGGAAAATCAGTGCTTTTTTCCTCATAATTTTATTAATAGTGTTAGAACTCCACTCTTTCTTCTTAATGCTGCTTATGATTCATGGCAGAACTTGTTCAACAATTCAAATATTCTAAATACTCAATACAGGAATCTCTGTTATGGCAGTATCAATGCTAGgaaaatgttattgttaGTACATGATGCTCAATTTGTTGTCTTGGTTCAAGGCCTACAACAAACTTCAGCGGTCACTGAATGCATTGTCACAGACGATTCTGAAGTGGCTGAGACTTTCATATCTCAAGTTGACAGTGCTGCTGCATTCCACAATGCAAACGCTTTGGCTTGGGGCAGAGGTTGA 750 0.4067 MDSAITGSRSEHIGVTRVPNGGINTPQDAYGLEKLATEEICKHYNKAFGIECRIGRFHNIYGPFGTWKGSFRAADGKEGKWLIRGSSSRVNVSGKELLVLHCSLLELEPSYIYAFYPLQNFNSEDNVFGQLQWKIWENQCFFPHNFINSVRTPLFLLNAAYDSWQNLFNNSNILNTQYRNLCYGSINARKMLLLVHDAQFVVLVQGLQQTSAVTECIVTDDSEVAETFISQVDSAAAFHNANALAWGRG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02533 249 Gene3D - 24 57 - -
Car06g02533 249 PANTHER BNAC07G27420D PROTEIN 25 72 - -
Car06g02533 249 PANTHER EPIMERASE-RELATED 25 72 - -
Car06g02533 249 Pfam NAD dependent epimerase/dehydratase family 23 64 IPR001509 -
Car06g02533 249 Pfam Pectinacetylesterase 135 170 IPR004963 GO:0016787
Car06g02533 249 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 71 IPR036291 -
Car06g02533 249 Gene3D - 58 70 - -
Car06g02533 249 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 205 244 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02533 Car-Chr6 29606254 29609617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02533 140 165 Carbohydrate Esterase AT1G57590 80.769 1.10e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02533 K10046 - oeu:111393710 99.3673