Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02519 ATGATCATCATTTCTTCAAAAAAATATTCTTCAAAAAAAGTTATCAAGCACAGTGATAGGACTAAAATAACCTTTTACACAGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAACTCATCATTGCAATTTTTGCACTTAGCAATAACAAAATTGATGTTGTCAAGTATTCTCTCCTTGGTTCCATCCTCTCCAACCTTCTCCTTGTTCTTGGAACCTCTCTATTATGTGGTGGCATTGCAAACCTTAGATCAGAGCAAAAATTTGATAGAAGACAGGCAGACATCAACTTGCTTATGCTTCTTGTGGCATTATTGTGCCACTTACTGCCAATGTTGTTCCAATATGGCGGTGCTTCAGCGGCCGTCGATGCAGACTCATCTCTGCAGTTTTCTAGAGCTGCTAGCATTGTGATGGTGATTGCATATTTTGCATACCTTATCTTCCAACTATGGACTCATAGGCAATTATTTGAAGCTCAAGATGAAGACGATGAAGAGGGTGAGAATGCCTCAGAAGAAGCGGTTATAGGTTTTTGGAGTGGGTTTGTTTGGCTACTTAGCATGACTGTGTTTATTTCTATTTTGTCTGAATATGTCGTCGACACTATCGAGGATGCATCAGATTCATGGGGTTTATCTGTCAGCTTCCTCAGTATAATCGTGCTACCAATTGTTGGCAATGCAGCTGAACATGCAGGAGCCATCATATTTGCTTTCAAGAATAAGCTGGACATATCTTTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTGGCATGTTTGTGGTTCCTCTCTGTGTGATTGTTGCTTGGATTCTTGGTATCAAAATGGACCTCAATTTCAATCTCCTAGAAACAGGTTCTCTTGCTTTGGCAATTATAACGACAGGCTTCGCATTACAGGATGGAACTTCTCACTACTTAAAAGGCTTTATTCTCCTACTCTTGTACATTGTTATTGGGGCATGCTTTTTTGTACAAAGAACAACCTCCGACCATGGTAATCATATTGCTAGCATAACTCTTCATTCAGCAACTAATGCCAATTTTAAAGCTTAA 1074 0.3994 MIIISSKKYSSKKVIKHSDRTKITFYTGPTVGGLLNATCGNATELIIAIFALSNNKIDVVKYSLLGSILSNLLLVLGTSLLCGGIANLRSEQKFDRRQADINLLMLLVALLCHLLPMLFQYGGASAAVDADSSLQFSRAASIVMVIAYFAYLIFQLWTHRQLFEAQDEDDEEGENASEEAVIGFWSGFVWLLSMTVFISILSEYVVDTIEDASDSWGLSVSFLSIIVLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIGMFVVPLCVIVAWILGIKMDLNFNLLETGSLALAIITTGFALQDGTSHYLKGFILLLLYIVIGACFFVQRTTSDHGNHIASITLHSATNANFKA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02519 357 Gene3D - 29 179 IPR044880 -
Car06g02519 357 Gene3D - 180 330 IPR044880 -
Car06g02519 357 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 22 342 IPR004713 GO:0006812|GO:0008324|GO:0016021
Car06g02519 357 TIGRFAM caca2: calcium/proton exchanger 22 330 - -
Car06g02519 357 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 22 342 - -
Car06g02519 357 TIGRFAM cax: calcium/proton exchanger 22 330 IPR004798 GO:0006816|GO:0015369
Car06g02519 357 Pfam Sodium/calcium exchanger protein 23 157 IPR004837 GO:0016021|GO:0055085
Car06g02519 357 Pfam Sodium/calcium exchanger protein 187 325 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02519 Car-Chr6 29388115 29391960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02519 22 333 Antiporters AT2G38170 71.835 7.07e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02519 K07300 - gmx:100782052 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01272 03 57188921 57193141 Car06g02519 06 29388115 29391960 PCT